Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1117 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  237 bits (605), Expect = 3e-66
 Identities = 154/438 (35%), Positives = 233/438 (53%), Gaps = 16/438 (3%)

Query: 407 QLLPTITNAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQS 466
           Q+L  +T + + +  S    +       +  SP+M  G  + ++   +DIT     E+Q 
Sbjct: 407 QILLRLTESIRDDTASFKRRDGSPLPVEYIASPVMDRGNQVGVVLGFRDITQRRLVERQL 466

Query: 467 QAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGE 526
           + A+  AE   R ++EFLA MSHE+RTP+NGV+G++ LL  T L++EQR     +  SGE
Sbjct: 467 REAKEAAEAGNRTKSEFLATMSHEIRTPMNGVIGMTGLLLDTRLSEEQRHFAETIRDSGE 526

Query: 527 HLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTA 586
            LL V+NDILDFS++E GK  +   EF L  LV ++  I  P  + KG+E+    +    
Sbjct: 527 SLLTVINDILDFSKMEAGKLDLDYTEFELVPLVESVVDILAPRAHAKGIEIASLIDPRLR 586

Query: 587 AIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEG-DPLAQLVIQVVDTGIGIREQ 645
            +VRSD  R+ Q+L NL  NA+KFT +G + +E+ L++G D  A     V DTGIGI  +
Sbjct: 587 MLVRSDPGRLRQVLMNLGGNAVKFTEKGGVSIEVSLLDGPDAPAMARFDVRDTGIGIPPE 646

Query: 646 DLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIE 705
               +F  F Q +++T R YGG+GLGL I   L E++ G++ V S  G G+RF I LP+E
Sbjct: 647 AQGRLFSMFSQVDASTARRYGGTGLGLAISRRLAELMGGEVGVESAVGRGSRFWITLPLE 706

Query: 706 LVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQA 765
           L+    APQ   P PD         RVL+V+DN  N  + +   R +G++V    D    
Sbjct: 707 LL----APQSAAP-PDL-----SGHRVLVVDDNPVNCDVIERQLRAFGVEVHACLDAGSG 756

Query: 766 IEELKI-----HDYDLVLMDNQLPYLDGVETTRTIKKVLHLPVVVYACTADGLEETRQAF 820
           + EL         +++ ++D+Q+P + G E  R I  +  L       T+       Q  
Sbjct: 757 MGELTRAAAMGTPWEVAVVDSQMPVVTGSEMVRMIHAIPMLAGTRIVVTSSQGMPADQND 816

Query: 821 FHAGAEYVLVKPLKEQTL 838
                +  L KPL++ TL
Sbjct: 817 GQPAIDAFLHKPLRQSTL 834



 Score = 78.6 bits (192), Expect = 2e-18
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 728 KTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLD 787
           K LR+L+ EDN  N  +A    RK G  V  V DG +A+E +++  YD+VLMD Q+P +D
Sbjct: 866 KRLRILVAEDNPVNQQVALGLLRKLGHTVDVVGDGAEALEAVRLLPYDVVLMDVQMPEMD 925

Query: 788 GVETTRTIK--KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHF 845
           G+E TR I+   +    V + A TA+ +    Q  F AG +  + KP+    L +AL  +
Sbjct: 926 GLEATRAIRALPLAAAQVPIVAMTANAMRGDDQMCFDAGMDGYISKPIDRHKLAEALAKY 985