Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1248 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  217 bits (552), Expect = 4e-60
 Identities = 132/395 (33%), Positives = 217/395 (54%), Gaps = 14/395 (3%)

Query: 454  QDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDE 513
            +D+T      +    A+  AE++AR +++FLA MSHE+RTP+N ++G++ L  +T L+  
Sbjct: 694  EDVTQARATAEAQARAKDAAEDAARTKSDFLANMSHEIRTPMNAIIGMAHLALKTDLDPR 753

Query: 514  QREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEK 573
            Q+++V  +  SG+HLL ++NDILDFS++E GK  ++  E  L +++  +  +       K
Sbjct: 754  QKDYVRKIQQSGQHLLGIINDILDFSKIEAGKLEVEATEIHLDKVLENVGNLISEKATAK 813

Query: 574  GLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEG-DPLAQLV 632
            GLEL+ +        +  D +R+ Q+L N  NNA+KFT  G I V ++L+E   P   L 
Sbjct: 814  GLELLFDVGAGVPLDLMGDALRLGQVLINYANNAVKFTEAGEIVVAVRLMEDLGPDVMLR 873

Query: 633  IQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEY 692
             +V DTGIG+ ++    +F+ F QA+++TTR++GG+GLGL I   L E++ G + V S  
Sbjct: 874  FEVRDTGIGLTDEQKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGVDSVP 933

Query: 693  GIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKY 752
            G G+ F     +    KP AP  L+P  + Q       R+L+V+DN     +        
Sbjct: 934  GQGSTFWFTARLG-KGKPRAP--LIPEAELQ-----GRRMLVVDDNENARAVLVDMLSAM 985

Query: 753  GLDVSWVTDGLQAIEELK--IHD--YDLVLMDNQLPYLDGVETTRTIKKV-LHLPVVVYA 807
              +V  V  G +A++ ++  + D  YD+V +D Q+P +DG+E    I  + L  P  +  
Sbjct: 986  SFEVDAVDSGAKALDAIRDAVLDLPYDVVFLDWQMPDMDGLEVAEQIHSIRLPFPPHLIM 1045

Query: 808  CTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842
             TA G EE  +    A    VL+KP+    L  ++
Sbjct: 1046 VTAYGREEIIKGAQAADIGEVLIKPVSPAALFDSI 1080



 Score = 82.0 bits (201), Expect = 2e-19
 Identities = 43/126 (34%), Positives = 69/126 (54%)

Query: 730  LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGV 789
            L+VLLVEDN  N  +A    R  G++V    +GL A+E+ +   YDL+LMD Q+P +DGV
Sbjct: 1110 LKVLLVEDNDLNQEVAGEILRDAGIEVEIADNGLIAVEKARAGVYDLILMDMQMPVMDGV 1169

Query: 790  ETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHH 849
              TR I+++ H+ + + A TA+ ++  R     AG    + KP+   T+   +  +    
Sbjct: 1170 TATREIRRLGHVDLPIIAMTANAMQADRDKCLEAGMNDHIAKPIDPDTMFSTISRWCAAE 1229

Query: 850  GQKNAG 855
              + AG
Sbjct: 1230 PPRRAG 1235