Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  238 bits (606), Expect = 2e-66
 Identities = 140/416 (33%), Positives = 240/416 (57%), Gaps = 18/416 (4%)

Query: 434  RWNLSPIM-VEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELR 492
            RW + P    +G I  I+   QDIT      ++ + A+  AE++++ ++EFLA MSHE+R
Sbjct: 645  RWEVRPWHHYDGSIGGIMMLTQDITESCLQREELKKAKILAEQASKAKSEFLANMSHEIR 704

Query: 493  TPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNE 552
            TPLNGV+G + L+ +T L++ Q ++++++  SG  LL ++NDILDFS++E GK  +  + 
Sbjct: 705  TPLNGVIGFTDLVLKTDLSETQAQYLSIVNQSGNALLNIINDILDFSKIEAGKLELDIDR 764

Query: 553  FRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTH 612
              L EL      I     ++KGLE+++N +      +  D +R+ QI+ NLL NA KFT 
Sbjct: 765  CDLYELTEQTSDIITYEVHKKGLEMLLNIHPDIPRFIWVDSVRVKQIMVNLLGNASKFTE 824

Query: 613  QGSIRVELQLIEGDPLAQLVI---QVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSG 669
            +G I ++L  I+ D  ++ ++    V DTGIGI+ +  T IFE F Q + +TT++YGG+G
Sbjct: 825  EGEIELQLYPIDKDEASREMVIRFSVRDTGIGIKAEKQTKIFEAFSQEDVSTTKKYGGTG 884

Query: 670  LGLTIVHSLVEMLSGQLHVSSEYGIGTR--FEIQLPIELVEKPDAPQQLLPAPDPQPLFD 727
            LGLTI + L++++   L + S  G G+   F++ +  E  E+    + L           
Sbjct: 885  LGLTISNRLLQLMHSGLQLHSTVGKGSTFYFDLNVKYEYGERITLEEDL----------- 933

Query: 728  KTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEE-LKIHDYDLVLMDNQLPYL 786
                VL+V+DN  N  I +      G+  S   +G +AI++ ++   +D+VLMD  +PY+
Sbjct: 934  SVENVLIVDDNDNNRMIIERMMALRGISTSQAKNGFEAIQKFVEGEKFDVVLMDYHMPYM 993

Query: 787  DGVETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842
            +G+ET R I++++    +++  ++   ++  +A    G    LVKP+K Q ++ AL
Sbjct: 994  NGIETIRKIREIVDRQPIIFLHSSSDDDKILKACKELGVRKKLVKPIKLQEMYDAL 1049



 Score = 60.1 bits (144), Expect = 9e-13
 Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 16/168 (9%)

Query: 694  IGTRFEIQLPIELVEKPDA------PQQLLPAPD-----PQPLFDKTLRVLLVEDNHTNA 742
            +G R ++  PI+L E  DA       Q    A D     P+ LF    +VL+VEDN  N 
Sbjct: 1030 LGVRKKLVKPIKLQEMYDALLSINKKQDYRKATDQNIDLPKNLFPNDGKVLIVEDNTINM 1089

Query: 743  FIAQAFCRKYG--LDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH 800
             +A+           +    +G +A+E +K     ++ MD Q+P ++G E T+ I+K  +
Sbjct: 1090 LLAKTVIHNLSPATAILEAANGKEALEVMKDELPSVIFMDVQMPEMNGYEATQAIRKKYN 1149

Query: 801  L-PVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALE--HF 845
               +++ A TA  ++  R+    AG    + KP  E+ + K +E  HF
Sbjct: 1150 KHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKWHF 1197