Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  235 bits (599), Expect = 1e-65
 Identities = 141/421 (33%), Positives = 235/421 (55%), Gaps = 14/421 (3%)

Query: 434 RWNLSP-IMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELR 492
           RW + P    + +I  I+   +DIT     +   Q + R AE++ R ++EFLA MSHE+R
Sbjct: 490 RWEIRPWYRSKEKIGGILMLTEDITEAYFQKNDLQQSMRHAEQANRAKSEFLANMSHEIR 549

Query: 493 TPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNE 552
           TPLNG++G S L+ +T LND Q ++++++  S   LL ++NDILDFS++E GK  +    
Sbjct: 550 TPLNGIIGFSDLVLKTELNDRQEQYLSIVNQSANSLLNIINDILDFSKIEAGKLDLDIER 609

Query: 553 FRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTH 612
           + L ELV     I   + ++KGLE+++N +         D +R+ Q+L NLL NA KFT 
Sbjct: 610 YDLYELVEQASDIITYVIHQKGLEMLLNISPNIPRFAWIDSVRLKQVLVNLLGNASKFTD 669

Query: 613 QGSIRVEL-QLIEGDPLAQLVIQ--VVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSG 669
           +G I ++L  L   +   ++ I+  V DTGIGI+ +    IFE F Q + +TT++YGG+G
Sbjct: 670 KGEIELKLTPLSNSNKNGEMDIRFSVRDTGIGIKSEKQDKIFEAFSQEDVSTTKKYGGTG 729

Query: 670 LGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKT 729
           LGLTI + L++++  +L ++S    G+ F   L I+  +    P +  P           
Sbjct: 730 LGLTISNRLLQLMGSKLQLTSTPNRGSTFYFDLRIKCEDGQAIPLEGEP---------NL 780

Query: 730 LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEEL-KIHDYDLVLMDNQLPYLDG 788
            ++L+V+DN  N  I +      G+      +G +AI+ L    +YD++LMD Q+PYL+G
Sbjct: 781 HKILIVDDNANNRMIIERMLALKGIQTVQAKNGYEAIQRLVDGEEYDVILMDFQMPYLNG 840

Query: 789 VETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHH 848
           ++T R I+       +++  ++   +    A       + L+KP+K Q ++ AL   KH+
Sbjct: 841 IDTARKIRANFKEQPIIFLHSSSEDKTISLASKELSIPHRLIKPIKMQDMYDALLKIKHN 900

Query: 849 H 849
           +
Sbjct: 901 N 901



 Score = 61.6 bits (148), Expect = 3e-13
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 724  PLFDKTLRVLLVEDNHTNAFIAQAFCRKYG--LDVSWVTDGLQAIEELKIHDYDLVLMDN 781
            PL  +   +L VEDN  N  + +           V   ++G QA+E LK++  D++ MD 
Sbjct: 916  PLLTEKSSILFVEDNAINMLLGKTVIHNISPKTTVLEASNGKQALELLKVNLPDMIFMDV 975

Query: 782  QLPYLDGVETTRTIKK-VLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHK 840
            Q+P ++G E T+ I+K   +  ++++A TA  L+  ++    AG +  + KP  E+ L +
Sbjct: 976  QMPEMNGYEATKIIRKEYKNKNLLIFALTAGNLKGEKEKCMEAGMDDFIAKPFVEEDLIR 1035

Query: 841  ALEHF-KHHHGQKNA 854
             LE + K     KNA
Sbjct: 1036 LLEKWSKSIDKHKNA 1050