Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  218 bits (555), Expect = 1e-60
 Identities = 135/400 (33%), Positives = 221/400 (55%), Gaps = 14/400 (3%)

Query: 449 IITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRT 508
           +I+ G+D+T     EK  + A+  AE + R ++EFLA MSHE+RTP+NG+LG+  LL+ T
Sbjct: 545 MISVGRDVTEQKLWEKGLKEAKEVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGLLEHT 604

Query: 509 PLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRP 568
            ++DEQ+  V V+  SGE LL ++ DILD+S++E+GK  ++ +  + +E +  +  I+  
Sbjct: 605 KMDDEQQSIVKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFREELNKVINIFSG 664

Query: 569 LCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPL 628
           +   K L L ++   T    +  D  +++QILFN++ NA+KFT +G   V ++ + G+P+
Sbjct: 665 MVVGKELSLNLDIAPTIPQWLILDNEKLSQILFNIIGNAVKFTPKGG-DVSIK-VSGEPI 722

Query: 629 A----QLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSG 684
                 L   V DTG+GI +  +  +  PF Q    T  E  GSGLGL I + L+E++ G
Sbjct: 723 LDKNFMLYFNVKDTGVGIPKSKIDQLINPFTQTGRGTAEEKSGSGLGLAIANKLIELMGG 782

Query: 685 QLHVSSEYGIGTRF------EIQLPIELVEKPDAPQQLLPAPDPQPLFDK-TLRVLLVED 737
            L + SE G G+ F       I    E V K D  +          + DK    +LL ED
Sbjct: 783 SLQIESEVGKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSHISDKFPKEILLAED 842

Query: 738 NHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKK 797
           N  N    +   ++ G  V  V+ G +A++ ++   YD++ MD Q+P +DG+E +R IKK
Sbjct: 843 NDINLKFMKLLMKQLGYSVDTVSTGEEAVKAVQKKRYDMIFMDYQMPVMDGLEASREIKK 902

Query: 798 VLHLPVV-VYACTADGLEETRQAFFHAGAEYVLVKPLKEQ 836
           +     + +   +A+  +E  +  + AG +  L KP+K Q
Sbjct: 903 MKEGKYIRIIGLSANVFKEDIERAYEAGMDDYLTKPIKIQ 942