Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1153 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  201 bits (512), Expect = 2e-55
 Identities = 158/537 (29%), Positives = 252/537 (46%), Gaps = 35/537 (6%)

Query: 329  EFIGSKIYEFDYFGRTLEQSFRRLANKEKQFED--LFNFALSPTMLWNTSGRLIRMNPSA 386
            EF G ++        T  +    L  + + F D  + N      +L   SGR++  N +A
Sbjct: 480  EFQGEEVLLSSVVDITRRREAEELLRRTQAFLDAVIDNVPSVLYVLDGDSGRVLLWNRAA 539

Query: 387  QIQF--LREDAQNHFLFEILERQLLPTITNAAQGNNPSDVTT----------EVDGRVYR 434
            +  F   R D ++  L E+L     P    A  G +P  + +            +  V+ 
Sbjct: 540  EDCFGTRRADIEDRTLAEVLG----PETGRALAGGDPGSMRSLGVEELVLPRNGENTVFA 595

Query: 435  WNLSPIMVEGQ-IISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRT 493
                P    G     II    DIT    A ++ + A+  AE +   + EFLA +SHE+RT
Sbjct: 596  LQRHPFEWSGDGRCRIICVANDITASRRAREELRQAKERAERADAAKTEFLATVSHEMRT 655

Query: 494  PLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEF 553
            PLNG+LG+ +LL    L+  +R +   +   G  LL  +NDILD  ++E GK  +     
Sbjct: 656  PLNGILGLCRLLLTGQLHAGERRYAMSIMRCGHGLLDQVNDILDLRKIEDGKLDLDPTPC 715

Query: 554  RLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQ 613
             L  ++  +      L NEKG+ L ++        V  D+ R+ QIL NL+ NA+KFT +
Sbjct: 716  ALLPVLEEVVATVEGLANEKGIYLDLDIAPEVPDQVVIDRQRLRQILVNLVGNAVKFTER 775

Query: 614  GSIRVELQLIEGDPLA----QLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSG 669
            G + + + +  G   +     L + V DTGIG+       IFE   QA+ T  R +GGSG
Sbjct: 776  GGVDLRVDIEPGPERSGTGEMLRLAVRDTGIGVPADRRAAIFEKLEQADPTIARRFGGSG 835

Query: 670  LGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQ---QLLPAPDPQPLF 726
            LGL IV  L++ + G + V S  G+G+ F + +P+  V++P  P    +LLP        
Sbjct: 836  LGLAIVRHLLDAMQGSIRVDSVEGLGSVFTVTIPLLRVDEPALPARPGRLLPISRV---- 891

Query: 727  DKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYL 786
             ++L +LLVED+  N  +A       G  ++    G  A+E      +D +L+D +LP +
Sbjct: 892  -RSLALLLVEDDAINREVALGLLSDAGHRITVAETGESALELATRRHFDAILLDIRLPDI 950

Query: 787  DGVETTRTIKKVL---HLPVVVYACTADGLEETRQAFFHAGAEYVLVKPL-KEQTLH 839
            DG E  R I+ +       V + A TA+     R  +  +G + V+ KP+  E+ +H
Sbjct: 951  DGPEVARRIRALEDADRAAVPIVAVTANVFAADRARYIASGIDAVIEKPIFPERLMH 1007