Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  201 bits (511), Expect = 2e-55
 Identities = 132/432 (30%), Positives = 219/432 (50%), Gaps = 19/432 (4%)

Query: 419  NNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESAR 478
            N P      V G+ +  NL      G    II    D+T +   E++ Q     AE + R
Sbjct: 624  NRPFSWLVHVAGKSWL-NLEATNSSGNYWLIIVT--DVTEMKVREEELQRLLSRAEAADR 680

Query: 479  VRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDF 538
             ++EFLA MSHE+RTP+NGVLG+++LL ++ L+  Q+    ++  SG  LL ++NDILDF
Sbjct: 681  AKSEFLANMSHEIRTPMNGVLGMAELLAKSKLDTRQKTFTDIIVKSGNALLTIINDILDF 740

Query: 539  SRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQ 598
            S++E G+ +++   F   E V  +  +      EK +EL+V  + + +  V  D  R  Q
Sbjct: 741  SKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIELIVRIDASVSGKVIGDAGRFRQ 800

Query: 599  ILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLV-IQVVDTGIGIREQDLTVIFEPFMQA 657
            I+ N++ NA+KFT  G + VEL     +    +  ++V D+GIGI    L  IF+ F Q 
Sbjct: 801  IVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSLRVEDSGIGIPVDKLETIFDKFSQV 860

Query: 658  ESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVE-KPDAPQQL 716
            + + TR + G+GLGL I   LV +  G+++V SE G G+ FE+ +P +++E + D P   
Sbjct: 861  DGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVGRGSAFEVDIPFQVMERRRDVPLLS 920

Query: 717  LPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKI----- 771
            +   D        +RVL+++DN  N  I     R +G+D   V +G   I  L+      
Sbjct: 921  VAIDD--------IRVLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASLG 972

Query: 772  HDYDLVLMDNQLPYLDGVETTRTIKKVLHL-PVVVYACTADGLEETRQAFFHAGAEYVLV 830
               D +++D  +P ++G++    I+       + +   T+  +      F     +  L+
Sbjct: 973  FAIDAIILDYHMPVMNGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDLSVQAHLM 1032

Query: 831  KPLKEQTLHKAL 842
            KP + + L   L
Sbjct: 1033 KPARARLLRSTL 1044