Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  114 bits (285), Expect = 9e-30
 Identities = 86/278 (30%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 50  QAQLLQSEKMASVGQLAAGVAHEINNP----IGFCLSNLNTLRDYAEVFAQLADFVEQSA 105
           + Q  QS+K+ +VG LA GVAH+ NN     IG+C   L   R               S 
Sbjct: 515 EVQFAQSQKLQAVGHLAGGVAHDFNNVLTAIIGYCDLLLAKHRP--------------SD 560

Query: 106 PSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRF 165
           PSF                       D++ + + +    +R   +V  L + S     R 
Sbjct: 561 PSFP----------------------DIMQIKQNA----NRAAGLVRQLLAFSRRQTLRP 594

Query: 166 AECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACD 225
               L D I  A  ++       + +D + A +L  +K    + +QV++N+ +NA  A  
Sbjct: 595 QVIELGDVISDAAALLRRLIGERITLDVEHARDLWPVKVDVNQFEQVIVNLAVNARDAMP 654

Query: 226 EHGELTITTDTLNEKGKA----------WVQVQIADNGHGISPEHLAKIFDPFFTTKPVG 275
           + G LTI T  +   G A          +V V++ D G GI P+ + KIF+PFF+TK VG
Sbjct: 655 DGGTLTIRTGNVPAAGCAAYGQGLPEGDYVMVEVVDTGTGIPPDIMDKIFEPFFSTKEVG 714

Query: 276 VGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
            GTGLGLS  +GIV++  G I   SE+G+GT F +  P
Sbjct: 715 KGTGLGLSTVYGIVQQTGGTILADSEMGRGTTFRVFLP 752