Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 1e-28
 Identities = 91/312 (29%), Positives = 146/312 (46%), Gaps = 58/312 (18%)

Query: 6   QYQRIYERERKARILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQL 65
           Q  R+    +++R   E+L+EE+++AL                AQ  L+QS K+A++GQ+
Sbjct: 322 QRWRLARLRQRSREELEQLVEERTQAL--------------RTAQDGLVQSAKLAALGQM 367

Query: 66  AAGVAHEINNPIGFCLSNLNTLR---DYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQ 122
           +A +AHEIN P+      L TLR   D+  V                  + YQA      
Sbjct: 368 SAALAHEINQPLTAQRMQLATLRLLLDHGRV-----------------DDAYQALTPLDD 410

Query: 123 QHD-LAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIV 181
               +A +   + +   +S SGL    D+ T +    H  D R  + ++   ++   R  
Sbjct: 411 MLTRMAALTGHLKTFARKSPSGLRERLDLATVVDQSLHLLDARLRDESIGVVLDLT-RPA 469

Query: 182 WNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEKG 241
           W                   ++G A  ++QVL+N+  NA  A  +     +    L+   
Sbjct: 470 W-------------------VRGDAIRLEQVLINLLRNALDAMVDKPRKRLEI-RLHADE 509

Query: 242 KAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSE 301
           + W Q+ ++D+G GI+ EHL  +FDPFFTTKPVG G GLGL++++ IV +  G++ + S 
Sbjct: 510 QLW-QLTVSDSGGGIAEEHLNSVFDPFFTTKPVGDGLGLGLAVSYAIVHELGGRL-IASN 567

Query: 302 VGQGTRFTLLFP 313
            G G  FTL  P
Sbjct: 568 RGDGAVFTLTLP 579