Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 1e-29
 Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 47/306 (15%)

Query: 22  EKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCL 81
           E+ + ++++AL +    LQ+ + +   A+  L  ++KM +VGQL  G+AH+ NN +   +
Sbjct: 418 EERVAQRTQALAEANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIAHDFNNMLTGII 477

Query: 82  SNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESA 141
            +L+ ++ Y                                   +A  R D +    ++A
Sbjct: 478 GSLDLMQRY-----------------------------------IAAGRSDEIGRFTDAA 502

Query: 142 -SGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLP 200
            S  HR   +   L + S          + N  + S   +        + +  +L  ++ 
Sbjct: 503 VSSAHRAAALTHRLLAFSRRQSLDRRPLDPNQLVASLEDLFRRTKGAHITLKVKLGHDIW 562

Query: 201 KIKGIAPEIQQVLMNMFINASHACDEHGELTITTD---------TLNEKGKA--WVQVQI 249
            +   A +++  L+N+ INA  A  + GEL I T          T  E  KA  +V + +
Sbjct: 563 PVNTDASQLENALLNLVINARDAMPDGGELLIETANSYLDGTDITTLEPVKAGDYVMLGV 622

Query: 250 ADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFT 309
            DNG G++P+ LAK FDPFFTTKP+G GTGLGLS+ +G  ++  G +++ SE GQGT   
Sbjct: 623 CDNGTGMAPKILAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVTIQSEPGQGTCVR 682

Query: 310 LLFPAI 315
           L  P +
Sbjct: 683 LYLPRL 688