Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., putative sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 7e-60
 Identities = 126/295 (42%), Positives = 186/295 (63%), Gaps = 9/295 (3%)

Query: 22  EKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCL 81
           E+ +E +++ L      LQ  +E+    ++QL+QSEK+AS+GQ+AAGVAHEINNPIGF  
Sbjct: 172 EQRVERRTQQLTQASEALQQEIEERKQLESQLVQSEKLASLGQMAAGVAHEINNPIGFVS 231

Query: 82  SNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESA 141
           SNL TL  Y +    + D   ++      +E      R ++Q +L F+ ED+  L++ES 
Sbjct: 232 SNLGTLGGYFQQLVAMLDAYREAELMLGANETTGRLQRLREQTELEFLMEDIPILIKESK 291

Query: 142 SGLHRVKDIVTSLQSVSH-SSDGRFAECNLNDCIESALRIVWNQFKYTM-LVDRQLAENL 199
            G+ RV  IV  L+  S   S  ++   +L   I+S L IV ++ K+   LV R   + L
Sbjct: 292 DGIGRVAHIVKDLKDFSRVDSAQQWQLADLQQGIDSTLNIVASELKHKADLVKRY--QPL 349

Query: 200 PKIKGIAPEIQQVLMNMFINASHACD-EHGELTITTDTLNEKGKAWVQVQIADNGHGISP 258
           P ++ +  +I QV+MN+ +NA+ A   E G  TIT  T ++   AWV +++AD G GI+P
Sbjct: 350 PPVECLPSQINQVIMNLVLNAAQAMGPERG--TITLGTAHQG--AWVCIEVADTGAGIAP 405

Query: 259 EHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
           E++ KIFDPFFTTKPVG GTGLGLS+++GIV+KH G+I+V+S+VG GT F +  P
Sbjct: 406 ENIKKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGEITVSSQVGVGTTFRVQLP 460