Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  175 bits (443), Expect = 3e-48
 Identities = 112/317 (35%), Positives = 167/317 (52%), Gaps = 34/317 (10%)

Query: 6   QYQRIYERER-----KARILAEKLLEEKSRALYDKVLELQSTLEQLNG----AQAQLLQS 56
           Q QRI E  R       R  AEK   E   AL + +      LE+ N      Q  L+QS
Sbjct: 269 QNQRIVEEIRLREMETLRAKAEKEAAEARAALAEGLARANRELEEANAKLRETQVHLIQS 328

Query: 57  EKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQA 116
           EKMAS+GQL AG+AHEINNP+ F LSN+ ++ ++      LA  + ++AP        + 
Sbjct: 329 EKMASLGQLVAGIAHEINNPLSFALSNVFSIENW------LAAVMTEAAPCLSEDHLVKL 382

Query: 117 WMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIES 176
               K+              + ++  GL RV+++V  L++ S   +G F   ++ + +ES
Sbjct: 383 DKARKR--------------IADTGQGLERVRELVVKLRTFSRLDEGEFKTVDIKEAVES 428

Query: 177 ALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDT 236
            L  + ++    + V R  AE+   +   A ++ QV+MN+  NA  A +  G +T+ T  
Sbjct: 429 VLLFLRHKMSDRIEVRRNFAED-NMLACYAGQLNQVIMNVVANAVDAIEGKGVITVRTF- 486

Query: 237 LNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKI 296
              +      + ++D G GI PE   +IFDPFFTTKPVG GTGLGLSI++GI++ H G+I
Sbjct: 487 ---RQDGMFAIAVSDTGSGIPPEIQERIFDPFFTTKPVGQGTGLGLSISYGIIKSHDGRI 543

Query: 297 SVTSEVGQGTRFTLLFP 313
            V+S  GQGT   +L P
Sbjct: 544 EVSSHPGQGTEIRILIP 560