Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  110 bits (276), Expect = 9e-29
 Identities = 91/295 (30%), Positives = 139/295 (47%), Gaps = 56/295 (18%)

Query: 36  VLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINN----PIGFCLSNLNTLRDYA 91
           V+      EQ N  + Q  QS+KM ++GQLA GVAH+ NN     IGFC      L+ + 
Sbjct: 398 VIHFIDATEQRN-LEMQFAQSQKMQAMGQLAGGVAHDFNNLLTAMIGFCDL---LLQRHG 453

Query: 92  EVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIV 151
                 AD ++    +   +   +  + F ++  L     +V   + E ++ L R+    
Sbjct: 454 AGDPSFADIMQVKQNANRAASLVRQLLAFSRRQALQPRLLNVTDALAELSNLLRRL---- 509

Query: 152 TSLQSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQ 211
                             L + IE  LR++  +    + VD               +  Q
Sbjct: 510 ------------------LGETIE--LRMIHGRALGLVRVD-------------PGQFDQ 536

Query: 212 VLMNMFINASHACDEHGELTITTDTLN-----EKGKA------WVQVQIADNGHGISPEH 260
           V++N+ +NA  A    G LTI T+ ++     ++G        +VQ+++AD G GI  E+
Sbjct: 537 VIINLAVNARDAMPGGGALTIRTNAVHVDQPIQRGPELMPAGDYVQIEVADTGTGIGKEN 596

Query: 261 LAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFPAI 315
           LA+IF+PFF+TK VG GTGLGLS  +GIV +  G I V SE GQG  F++  P I
Sbjct: 597 LARIFEPFFSTKEVGAGTGLGLSTVYGIVRQTDGFIFVESEPGQGATFSIYLPRI 651