Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., sensory histidine kinase in two-component regulatory system with ZraR (NCBI) from Escherichia coli BW25113

 Score =  121 bits (303), Expect = 4e-32
 Identities = 93/269 (34%), Positives = 141/269 (52%), Gaps = 51/269 (18%)

Query: 50  QAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFE 109
           Q ++ + EK+ ++G LAAGVAHEI NP       L++++  A+ FA+ A           
Sbjct: 233 QDEMKRKEKLVALGHLAAGVAHEIRNP-------LSSIKGLAKYFAERAP---------A 276

Query: 110 GSEFYQ-AWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVT----SLQSVSHSSDGR 164
           G E +Q A +  K+   L  V  ++L LV+ +   L  V D+ T    SLQ VS  ++ R
Sbjct: 277 GGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLALQAV-DLNTLINHSLQLVSQDANSR 335

Query: 165 FAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHAC 224
                     E  LR   N             + LP+I+     + QVL+N+++NA  A 
Sbjct: 336 ----------EIQLRFTAN-------------DTLPEIQADPDRLTQVLLNLYLNAIQAI 372

Query: 225 DEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSI 284
            +HG +++T    +E G A V++ + D+G GI+ + L  IF P+FTTK    GTGLGL++
Sbjct: 373 GQHGVISVTA---SESG-AGVKISVTDSGKGIAADQLDAIFTPYFTTK--AEGTGLGLAV 426

Query: 285 AFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
              IVE+H G I V S+ G+G+ FTL  P
Sbjct: 427 VHNIVEQHGGTIQVASQEGKGSTFTLWLP 455