Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 727 a.a., YccS/YhfK family integral membrane protein from Pseudomonas simiae WCS417

 Score =  608 bits (1569), Expect = e-178
 Identities = 326/710 (45%), Positives = 444/710 (62%), Gaps = 7/710 (0%)

Query: 11  LRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLK 70
           +R  WA    +YS+ + + L G +   WY    T + PL LG+IA+ALA+ DD + GRL 
Sbjct: 10  MRRLWALDKFSYSIRVFIALTGSMALCWYQDEMTLLIPLFLGIIASALAETDDSWQGRLN 69

Query: 71  SIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVY 130
           ++ +TL+CF+IAA S+E+LF  PW+FA+ L  ++F   MLGA+G RY +IA A+L+++VY
Sbjct: 70  ALAVTLVCFSIAALSVELLFPYPWIFAISLALATFCLTMLGALGERYGAIASATLILSVY 129

Query: 131 TMLGAHQS----TNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYL 186
           TM+G  Q     ++ W +PLLL++G+AWY  +S+LW A +  QPVQQ+LA +F +L  YL
Sbjct: 130 TMIGVDQRGGAVSDFWHEPLLLVAGAAWYGALSVLWQALFSNQPVQQSLARLFRELGRYL 189

Query: 187 EAKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIY 246
           + KS+LF P+  +  +  R+  A  N   V ALN  K + L R   G   S   R+L +Y
Sbjct: 190 KLKSSLFEPIRQLDVEARRLELAQQNGRVVAALNAAKEIILHRVGNGRPGSKVSRYLKLY 249

Query: 247 FLAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHD 306
           FLAQDIHER SSSHY Y  LAD F  SD+LFR + LL  Q KAC+ +A+SI+L   + +D
Sbjct: 250 FLAQDIHERASSSHYPYNALADAFFHSDVLFRCQRLLRQQGKACQTLAESIQLRQPFIYD 309

Query: 307 SASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPD-VAKPEE 365
            +   AL +L  SL +LR Q    W+ LL  L  L  NL+T+++ L + SNPD +A   +
Sbjct: 310 DSFAEALGDLNASLEHLRIQSNPAWRGLLRSLRALAANLSTLDRLLGDASNPDSLADATD 369

Query: 366 GVLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLT 425
             L D     L  MW R+R  +   SLLFRHALRLS+ LT+GY ++      +GYWI+LT
Sbjct: 370 SNLLDRAPRNLKEMWTRLRTQMTPTSLLFRHALRLSLALTVGYGMLHAIHASQGYWIILT 429

Query: 426 TLFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLN 485
           TLFVCQPNY AT++KL  RIIGT  GL +   L   FPS   Q +F + +G++FF  R  
Sbjct: 430 TLFVCQPNYGATRRKLGQRIIGTAIGLTVAWALFDLFPSPLVQSMFAIAAGLVFFINRTT 489

Query: 486 NYGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKV 545
            Y  AT  ITL+VLFCFNQ+G+GY + LPRL DTL+G  +A  AV L LPDWQ +RL+KV
Sbjct: 490 RYTLATAAITLMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKV 549

Query: 546 MAEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAA 605
           +A  +  N  YL QI+ QY  GK D L+YR+ARR+AHN DAALS  + NML EPG +R  
Sbjct: 550 LANTLTCNSIYLRQIMQQYAAGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKE 609

Query: 606 ADESFRFLTLNHALLSYISALGAHR-TRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHC 664
           AD  FRFL L+H LLSY+S LGAHR T+L  E    L+  +   +   +D +   L+N  
Sbjct: 610 ADVGFRFLVLSHTLLSYLSGLGAHRETQLPAEVREHLIEGAGNTLAASIDEIATGLANKQ 669

Query: 665 EECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLAS 714
                S  + + L   L +  ++ +   R+V  QL LI R L  L TLA+
Sbjct: 670 PIAIQSDAEEA-LAVELEQMPDEIDEGQRLVQTQLALICRQLGPLRTLAA 718