Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., FIG00348290: hypothetical protein from Variovorax sp. SCN45

 Score =  102 bits (255), Expect = 5e-26
 Identities = 134/604 (22%), Positives = 245/604 (40%), Gaps = 44/604 (7%)

Query: 52  GVIAAALAD----RDDRFSGRLKSIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGF 107
           GVI  A  D    R  +F   L + ++ L  F    F++++L   P    L L  ++F  
Sbjct: 55  GVIVTAPPDLPGPRRGKFFQMLPAPLIGLPLF----FAVQMLHTAPIRLGLLLVPATFMA 110

Query: 108 IMLGAMGARYASIAFASLLVAVYTMLG------AHQSTNIWFQPLLLLSGSAWYYLMSML 161
            +  A G R   IA A +   +++M        A      W   L     + W  L ++L
Sbjct: 111 FLAMAWGKRGIPIAIAVMFSMIFSMATQAPRDMADALERTWHFGLGAGLYAIWATLANLL 170

Query: 162 WHAFWPMQPVQQNLANVFLQLANYLEAKSTLFHP---VSNMIPQPHRIIEANLN--AATV 216
            +  +  Q V    A+V   LA  +  ++  F P     ++   P  ++   L   AA  
Sbjct: 171 LNGRFRTQSV----ADVLYSLAALMRTEAGQFLPHDDTRDVRDTPAPVLGQLLREQAALA 226

Query: 217 NALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQDIHERVSSSHYRYQELADHFGRSDIL 276
           + L   + + L   +         R   +  +  ++ +++ +S      L  H   +  L
Sbjct: 227 DQLQATRDIVLESPRTPR----RQRLAAMLVIVLEMRDQLLASELDLDALRAHPAHAAAL 282

Query: 277 FRFKYLLETQAKACRDIAQSIRLGHS-------YQHDSASIVALDELQLSLSYLRQQERR 329
              + +LE  A     +A ++ +              +A  V+ D+      ++      
Sbjct: 283 IEMRQVLEELADETMALADALLMRRQPAAVADRRPRLAAIHVSSDDSSNGGGHIGPTAAM 342

Query: 330 DWKSLLGQLGYLFNNLATVEKQLNNVSNPDVAKPEEGVLDDTEAHTLGSMWQRIRANLNK 389
             + L  ++G++ + +  +       + P++A                  W+        
Sbjct: 343 LARGLASRIGHINDEVLRLSAMARGDAEPNLAVVRANW--QMFVSPTDWSWRPFFTLWRW 400

Query: 390 DSLLFRHALRLSITLTLGYAIIQGFGI-ERGYWILLTTLFVCQPNYAATKQKLTARIIGT 448
           D    RHA+R S+ +  GYAI          YWILLT + V + + + T ++  AR+ GT
Sbjct: 401 DQPPLRHAIRASLAIAAGYAIAVSMPWGSHDYWILLTIVVVLRGSLSQTLERRNARVAGT 460

Query: 449 LAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGYATGFITLLVLFCFNQLGEG 508
           L G ++ V LL+  PS  + L  +  +  +  +F +  Y       T+L L   + L  G
Sbjct: 461 LLGCVLAVGLLSAHPSALALLAIVTVAQAIAHSFAVRRYLITAVAATVLGLVQAHMLNVG 520

Query: 509 YA---VVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVMAEAIDANKQY--LAQIIGQ 563
            A    +  R+ADTLIG ALA      +LP W+  ++  ++A  + A  ++  LA  +GQ
Sbjct: 521 VAPIFALFERIADTLIGAALA-WGFCYVLPSWERTQIPALVARVLTAQARHARLALGLGQ 579

Query: 564 YR-IGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAADESFRFLTLNHALLSY 622
            + I     L +R+ARR A++  +AL  A    L+EP   +   +        ++ LL+ 
Sbjct: 580 LQAIDSSPELEWRLARREAYDSLSALVQATQRSLSEPRAVQPPLEPLEHLQAHSYQLLAQ 639

Query: 623 ISAL 626
           +SA+
Sbjct: 640 LSAV 643