Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., FIG00956403: hypothetical protein from Variovorax sp. SCN45

 Score =  454 bits (1167), Expect = e-132
 Identities = 262/621 (42%), Positives = 367/621 (59%), Gaps = 10/621 (1%)

Query: 24  VLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKSIILTLICFAIAA 83
           V ILLTL  ++    +      + PL LG IA+ALA+ DD + GRL++ ++TL CFA  A
Sbjct: 23  VRILLTLGSLMALCGFTGHPDAVIPLFLGAIASALAETDDSWRGRLRAQVVTLACFAAIA 82

Query: 84  FSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYTMLGAHQSTNIWF 143
           F++E LF  PWLF      ++F   MLGA+ ARY +IA+A+L++A+Y  LG     +   
Sbjct: 83  FAVEALFGLPWLFITAFALAAFCLTMLGAVEARYKAIAYATLILAMYATLGIENMASHGT 142

Query: 144 ------QPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKSTLFHPVS 197
                 +PLLLL+G+AWY + S+LW A +P QPVQ  L  +F  L NY+  K++LF P+ 
Sbjct: 143 AALRGREPLLLLAGAAWYGVFSVLWCAIFPAQPVQARLVTLFTVLGNYVRFKASLFEPLR 202

Query: 198 NMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQDIHERVS 257
            +  +  R+  A LNA  V+ LN  K     R           R+  +Y +AQD+HER S
Sbjct: 203 GIDIERKRLALAQLNAEVVSELNAAKESIFRRIGARAPTGRISRYRGLYLIAQDVHERAS 262

Query: 258 SSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASIVALDELQ 317
           SSH  Y  LAD F  SD+L+R + +L  Q  AC  +++SI     +   + ++ AL +L+
Sbjct: 263 SSHDDYNALADAFFHSDLLYRCQRVLGLQGLACLRLSESIARREPFDTGTETVQALADLR 322

Query: 318 LSLSYLRQQERRDWKS-LLGQLGYLFNNLATVEKQLNNVSNPDV--AKPEEGVLDDTEAH 374
            ++ + R +     +  LL  +  L  NLA ++ QL   S P     + E G+ D +   
Sbjct: 323 SAIEHERARAVTPERLVLLASVEALARNLAQLDGQLAGASQPSARAGRTEMGLFDRSPRS 382

Query: 375 TLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTTLFVCQPNY 434
              ++ +R+R  L   S LFRHALRLSI L  GY ++Q     +GYWILLTTLFVCQ  Y
Sbjct: 383 WRDAV-ERVRRQLTVRSPLFRHALRLSIALVAGYGVMQVIHPAQGYWILLTTLFVCQQTY 441

Query: 435 AATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGYATGFI 494
             T  ++  RI GT  G++ G  LL  FP    Q V  V +GV+FFA R   Y  AT  +
Sbjct: 442 GDTIARMGQRIAGTALGVVAGWALLQLFPQPLVQSVIAVAAGVVFFATRATRYLLATASM 501

Query: 495 TLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVMAEAIDANK 554
           TLLVL CFNQ+G+   +++PRL DT IG A+A  AV+L+LP WQ++R++++ A A+  + 
Sbjct: 502 TLLVLMCFNQVGDSGVLLVPRLVDTAIGSAIAGLAVLLVLPHWQARRINELAATAMRGHA 561

Query: 555 QYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAADESFRFLT 614
            YL QI+ QYR G +D L YR+ARR+ HN DAALS AV++M  EPG  R  A  + RFL 
Sbjct: 562 GYLRQIVEQYRTGARDHLDYRLARRNDHNADAALSTAVSDMFREPGYVRPRAGVALRFLI 621

Query: 615 LNHALLSYISALGAHRTRLDD 635
            +H LLSY+SALGAHR  L D
Sbjct: 622 RSHTLLSYLSALGAHRAALPD 642