Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 727 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  604 bits (1558), Expect = e-177
 Identities = 324/710 (45%), Positives = 442/710 (62%), Gaps = 7/710 (0%)

Query: 11  LRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLK 70
           LR  W     +YS+ + + L G +   WY      + PL LG+IA+ALA+ DD + GRL 
Sbjct: 10  LRRLWGQDKFSYSIRVTIALTGSLALCWYQNEMALLIPLFLGIIASALAETDDSWQGRLS 69

Query: 71  SIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVY 130
           ++ +TL+CFAIAA ++E+LF  PW+F + L  ++FG  MLGA+G RY +IA A+L+ AVY
Sbjct: 70  ALAVTLVCFAIAALAVELLFPYPWIFVVALALAAFGLTMLGALGERYGAIASATLITAVY 129

Query: 131 TMLGAHQS----TNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYL 186
           TM+G  Q     T+ W +PLLL++G+AWY L+S+LW A +  QPVQQ+LA +F +L +YL
Sbjct: 130 TMIGVDQRGGQVTDFWHEPLLLVAGAAWYGLLSVLWQALFSNQPVQQSLARLFFELGSYL 189

Query: 187 EAKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIY 246
           + K++LF PV  +  +  R+  A  N   V ALN  K + L R      +S   R+L +Y
Sbjct: 190 KLKASLFEPVRTLDVEARRLELAQQNGKVVAALNAAKEIILHRVGNSQPNSKVSRYLKLY 249

Query: 247 FLAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHD 306
           FLAQDIHERVS+SHY Y  L + F  SD++FR + LL  Q  +C+++A+SIRL   +   
Sbjct: 250 FLAQDIHERVSASHYPYNALTEAFFHSDVMFRCQRLLRKQGSSCQELARSIRLRQPFVLA 309

Query: 307 SASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPD-VAKPEE 365
           S    AL++L  SL +LR Q    W+ LL  L  L  NLAT+++ L+  SNPD +A   +
Sbjct: 310 SGYPEALEDLNASLEHLRIQSNPAWRGLLRSLRALAANLATLDRLLSAASNPDSLADASD 369

Query: 366 GVLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLT 425
             L D    +L  +W R+R  L   SLLFRHALRL + L++GY ++      +GYWI+LT
Sbjct: 370 SSLLDRSPRSLKDVWTRLRTQLTPTSLLFRHALRLPLALSIGYGMVHLIHPTQGYWIILT 429

Query: 426 TLFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLN 485
           TLFVCQPNY AT++KL  RI GT  GL +G  L   FP+   Q +F V +GV+FF  R  
Sbjct: 430 TLFVCQPNYGATRRKLVQRIFGTAVGLTVGWALFDLFPNPVIQSLFAVVAGVVFFVNRTT 489

Query: 486 NYGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKV 545
            Y  AT  ITL+VLFCFNQ+G+GY + LPRL DTL+G  +A+ AV L LPDWQ +RL+K 
Sbjct: 490 RYTLATAAITLMVLFCFNQIGDGYGLFLPRLFDTLVGSLIAILAVFLFLPDWQGRRLNKA 549

Query: 546 MAEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAA 605
           +A  +     YL QI+ QY  GK+D L+YR+ARR+AHN DAALS  + NML EPG +R  
Sbjct: 550 LANTLACASVYLRQIMQQYAHGKRDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKE 609

Query: 606 ADESFRFLTLNHALLSYISALGAHR-TRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHC 664
           AD  FRFL L+H LLSY+S LGAHR T L  E   QL+  + + +   LD +   L+   
Sbjct: 610 ADVGFRFLVLSHTLLSYLSGLGAHRDTALPAEVQEQLIEGAGQSLASSLDEIANGLAARL 669

Query: 665 EECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLAS 714
                S  + + L   L +  ED +   R+V  QL LI R L  L TLA+
Sbjct: 670 PVAIHSDSEEA-LANALEQMPEDLDEHQRLVQTQLALICRQLGPLRTLAA 718