Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  146 bits (369), Expect = 3e-39
 Identities = 174/711 (24%), Positives = 315/711 (44%), Gaps = 63/711 (8%)

Query: 20  VNYS-----VLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKSIIL 74
           +NY+     VL L   +G+++    + L   + P    +  A L     RF    K +I+
Sbjct: 15  INYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNI--AGLDTPHKRF---FKRLII 69

Query: 75  TLICFAIAAFSIEILF--QTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYTM 132
               FA  +   ++L     P  F L   T   G  +   +G  +A +  ASLL A++T+
Sbjct: 70  GASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLG--VTAELGPLHAKLLPASLLAAIFTL 127

Query: 133 LGAHQSTNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKSTL 192
             A     +W   L+   G+ WY L +  W   W  QP++++L+ ++ +LA+Y EAK +L
Sbjct: 128 SLAGYMP-VWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKYSL 186

Query: 193 FHPVSNMIPQPHRIIEANL--NAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQ 250
               ++    P + +   L      V+ + QC       S + + D    R L I+  A 
Sbjct: 187 LTQHTD----PEKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYK--RMLRIFQEAL 240

Query: 251 DIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASI 310
           D+ E +S S ++ +E+     RS      ++  +T A   R +A  I L H        +
Sbjct: 241 DLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDI-LYHR-------L 292

Query: 311 VALDELQLSLSYLRQQERRDWKSLLGQLGYL-FNNLATVEKQLNNVSNPDVAKPEEGVLD 369
                ++  +  L +  R+   + +GQ  Y  F+ +A V +    +   D+   ++  + 
Sbjct: 293 PTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMP 352

Query: 370 DTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTTLFV 429
              A         +++ L+  S   R+A RLS+ L++   +     + + YWIL+T L V
Sbjct: 353 LLPA---------LKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLV 403

Query: 430 CQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGY 489
            Q  Y AT+ ++  R +GT+ GL+I    L F   +   L  ++ + +  +     NYG+
Sbjct: 404 TQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGW 463

Query: 490 ATGFITLLVLFCFNQL---GEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVM 546
           AT   T+  ++    L   GE Y  +LPRL DT+IGC +A    V + P WQS  L K  
Sbjct: 464 ATVGFTITAVYTLQLLWLNGEQY--ILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNA 521

Query: 547 AEAIDANKQYLAQIIGQYRIGKKDSLSY-RIARRHAHNQDAALSAAVTNMLAEPGRYRAA 605
            +A++A ++ +  I+ +    +   L++ R+    AHN    L  ++   + EP      
Sbjct: 522 HDALEAYQEAIRLILSE--DPQPTPLAWQRMRVNQAHN---TLYNSLNQAMQEPAFNSHY 576

Query: 606 ADESFRFLTLNHALLSYISALG--AHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNH 663
             +   ++T +  ++ +I+A+   A   R     + Q  L S  +  Q       Q    
Sbjct: 577 LADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRC-----QQRLE 631

Query: 664 CEECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLAS 714
            +E  +SG D++ ++   A   +  EG+A  + Q L  +   L  +HT++S
Sbjct: 632 YDEPGSSG-DANIMD---APEMQPHEGAAGTLEQHLQRVIGHLNTMHTISS 678