Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., Inner membrane protein YccS from Acinetobacter radioresistens SK82

 Score =  480 bits (1236), Expect = e-140
 Identities = 281/715 (39%), Positives = 415/715 (58%), Gaps = 22/715 (3%)

Query: 17  NKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKSIILTL 76
           N +  Y+V +++         +         PL LGV+AAAL+D DDRFS R+ +++ T 
Sbjct: 14  NTSFMYNVRMIIAFTATAFVPYLLGQQLATIPLTLGVVAAALSDIDDRFSVRIMNLVYTY 73

Query: 77  ICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYTMLGAH 136
           I F I A SI+ LF  P LFA+GL  S  G+I+LG++G RYA+I++  L+++VY+MLG H
Sbjct: 74  IGFFITAASIQFLFPYPVLFAIGLIISCIGWILLGSLGRRYATISYGCLVISVYSMLGVH 133

Query: 137 QSTNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKSTLFHPV 196
              + + QPLLL++G+ WY ++S +    +P++ VQ  L+  +  L ++L AKS LF   
Sbjct: 134 LFDHWYNQPLLLVAGAVWYGVISTISFLLFPVRQVQDKLSQCYSALGDFLFAKSALFDVD 193

Query: 197 SNMIPQPHRIIEANL-NAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQDIHER 255
                    +I+ +L N   V   N+ K   LTR K       + R L+ YF AQDIHER
Sbjct: 194 MTSDSYQQSMIDLSLENGKLVGIFNEMKTALLTRLKGDRGQRDTRRSLHYYFAAQDIHER 253

Query: 256 VSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASIVALDE 315
           V S+H  YQ+LA  F  SDILFRF+ +L  Q KAC+D+ +SI    +YQH+     A + 
Sbjct: 254 VDSAHIDYQKLAKIFEHSDILFRFQRILTIQGKACKDLGESILKRTTYQHNRRFKHAFEN 313

Query: 316 LQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNP----DVAKPEEGVLDDT 371
           L++SL  LR ++  D +  +  L  L+ NL +++ QL NV       + ++  E  L D 
Sbjct: 314 LRISLEKLRDEQYYD-QVWVNALFALYRNLKSIDAQLRNVETERYVVERSRYLENQLKDD 372

Query: 372 EAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTTLFVCQ 431
           +      +  RI+ +L  +S+LFRHA+RLSI L +GY  +Q   I+ GYWILLT LFV Q
Sbjct: 373 DLKGWDDIVIRIKQHLTPESVLFRHAVRLSIVLFIGYVFVQLTNIQYGYWILLTALFVSQ 432

Query: 432 PNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGYAT 491
           PN+ ATK++L  RI+GTL G++IG  +L F PS E QL  +V SGV+FF  R   Y  AT
Sbjct: 433 PNFNATKRRLRLRIVGTLVGIIIGYAILYFVPSIEGQLCLLVLSGVLFFELRSKQYAQAT 492

Query: 492 GFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVMAEAID 551
            FIT+L L  FN  G G+   LPR+ DTLIGCALA   V  I PDW+ +RL + +  A+ 
Sbjct: 493 AFITILALINFNLDGMGFTAALPRMIDTLIGCALAWFGVSFIWPDWKFRRLPRSIQRALS 552

Query: 552 ANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAADESFR 611
           A   YL +++ QY  G+ + L+YRI RR AHN DA +++ ++ +  EP         +F 
Sbjct: 553 AQCDYLNEVVQQYHEGRNNGLTYRIVRRSAHNTDAEMASLISTLATEPDFDPLQKSRAFE 612

Query: 612 FLTLNHALLSYISALGAHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHCEECDTSG 671
           FL L+H  LSYI+ALGAHR ++ D+ + +L       + Q LD +   L       +T  
Sbjct: 613 FLCLSHTFLSYIAALGAHREQVKDQEILKL-------LDQALDDIRGALLRD----ETPD 661

Query: 672 IDSSGL----EKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLASKFAVKVDS 722
           + +  +     +RL +  E+D+ S  ++LQQL L+  +L +L TL    + + D+
Sbjct: 662 LSAQNILIATRERLRQNHEEDQKSL-IILQQLSLMLSILQQLSTLKQSLSNEQDN 715