Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., ATP-dependent helicase from Rhodanobacter sp000427505 FW510-R12

 Score = 71.2 bits (173), Expect = 2e-16
 Identities = 87/339 (25%), Positives = 137/339 (40%), Gaps = 60/339 (17%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           L   Q+  V   + H LV A  GSGKT+VL A +  L+++    P  +L + F + A   
Sbjct: 9   LTAEQKAVVRHTEGHALVEAAPGSGKTTVLVAYLRRLVKTG-GNPNAMLALMFNKSAQLS 67

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRIINR-VEGKTVIMSPLANDSKLKQAWCIDWLKR 318
              RL+  +G E     + T H +G RI+ + V G  +    L    K   A+    LK 
Sbjct: 68  FEARLRRALG-EGPIPDVRTLHSIGNRILAQLVSGGMLPREKLETSGKKADAFARRALKE 126

Query: 319 HWM------TPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGL 372
            W       TPT              A   G  +  + V++      L    +   + G 
Sbjct: 127 AWARTGGSATPTQ-------------AQYQGFSQFITLVKSD-----LRPPAEVFEESGF 168

Query: 373 SKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQ---IDFNIMITRATEYVEK 429
           +                       C     A+Q +L+DQ +   I ++ +I R   Y++ 
Sbjct: 169 APD---------------------CRAFVIAFQLLLQDQEKRRVIFYDDLIYRPMVYLDA 207

Query: 430 -----GKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGS 484
                  F + ++ I+VDE+QDI+     ++Q L      + ++   GD  QSIY F GS
Sbjct: 208 HPELWSMFANRYERIVVDEFQDINAISFFMVQGLAGT---RASVMGCGDPKQSIYAFRGS 264

Query: 485 DVDL-TTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFI 522
            V L T  F   F   T + +  T+RF  +I  +AN  I
Sbjct: 265 RVTLMTRHFEQVFQPCTRYPMSRTFRFGHEIAMMANNLI 303



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 13/63 (20%)

Query: 599 TCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRAK 658
           T H SKG E   V+++ +  G FP+ +    +D             EERRL +V +TRA 
Sbjct: 569 TLHRSKGLEWSLVMMVGLTRGVFPSALPDKDVD-------------EERRLCFVGITRAM 615

Query: 659 EKV 661
           +++
Sbjct: 616 DRL 618