Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 88/340 (25%), Positives = 140/340 (41%), Gaps = 48/340 (14%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q+ AV    ++ L+LAGAGSGKT VL  R+++L+    A P  ++ V F   AA E
Sbjct: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIMSPL-ANDSKLKQAWCIDWLKR 318
           M  R++  +   A  +   TFH +  RI+        ++      DS  +Q      +K 
Sbjct: 71  MRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRLIKA 130

Query: 319 HWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKELQ 378
           H +   + K+W      W                      W+  Q D+    GL    + 
Sbjct: 131 HNL---DDKQWPARQVAW----------------------WINNQKDE----GLRPTHIN 161

Query: 379 ERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYVE-----KGKFR 433
                   Y +L          Y A+Q+       +DF  ++ RA E +      +  ++
Sbjct: 162 AFDPVTQTYLKL----------YTAYQEACDRAGLVDFAEILLRALELLRGNQHIREHYQ 211

Query: 434 SPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTGFA 493
           + +K I+VDE+QD +  +   L+ +      Q N+  VGDD QSIY + G+ V+    F 
Sbjct: 212 ARFKHILVDEFQDTNAIQYAWLRMMA---GAQSNVMIVGDDDQSIYGWRGARVENIEKFT 268

Query: 494 SRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
             F       L+  YR    I   +N  I  N  ++ K L
Sbjct: 269 REFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQL 308



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 10/71 (14%)

Query: 595 LDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           +  MT H++KG E   V ++ V+EG FP+++ A          E+     EERRL YV +
Sbjct: 554 VQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSA----------EEAGRLEEERRLCYVGM 603

Query: 655 TRAKEKVWVTY 665
           TRA +K+++TY
Sbjct: 604 TRAMQKLYITY 614