Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., helicase a single-stranded DNA dependent ATPase from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 55/346 (15%)

Query: 198 SPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAA 257
           S LN  QQ A        LVLAGAGSGKTSV+T ++++L+Q+   + + I+ + F   AA
Sbjct: 2   SRLNPRQQEARDYVGGPLLVLAGAGSGKTSVITRKIAHLIQNCGIRAQYIVAMTFTNKAA 61

Query: 258 QEMAERLKNKIGL-EAERLHINTFHQLGLRIINRVEGKTVIMSP---LANDSKLKQAWCI 313
           +EM ER+   +   E   L + TFH LGL II R E + +   P   + ++S +K A   
Sbjct: 62  REMKERVATLLRPGEGRGLTVCTFHNLGLNII-RKEHERLGYKPGFSIFDESDIK-ALLS 119

Query: 314 DWLKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLS 373
           D +++ +         +  +  W    +   + L     NP+         +Q A +   
Sbjct: 120 DIMQKEYSGDDGIDEIKNMIGAWKNDLVLPPEAL-EKARNPR---------EQTAAI--- 166

Query: 374 KKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYVEK---- 429
                                      Y  +Q+ LK  N +DF+ +I +  +  ++    
Sbjct: 167 --------------------------VYTHYQRTLKAFNAVDFDDLILQPVKLFQEHPEV 200

Query: 430 -GKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLF-AVGDDWQSIYQFAGSDVD 487
             ++++  ++++VDEYQD +  +  L++ L     G  N F  VGDD QSIY + G+  +
Sbjct: 201 LERWQNRVRYLLVDEYQDTNASQYLLVKMLI----GMRNQFTVVGDDDQSIYAWRGARPE 256

Query: 488 LTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
                   +    +  L+  YR   +I   AN  I  NPH   K L
Sbjct: 257 NLMLLKEDYPSLKIVMLEQNYRSTSRILRCANVLIANNPHAFEKQL 302



 Score = 42.0 bits (97), Expect = 9e-08
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 11/71 (15%)

Query: 595 LDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           +  MT HASKG E  YV I+ ++E   P R            S +     EERRL YV +
Sbjct: 553 VQMMTLHASKGLEFPYVFIMGMEEEILPHR-----------SSIEADTIEEERRLAYVGI 601

Query: 655 TRAKEKVWVTY 665
           TRA++ +  T+
Sbjct: 602 TRARQTLAFTF 612