Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., ATP-dependent DNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  114 bits (285), Expect = 2e-29
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 33/336 (9%)

Query: 198 SPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAA 257
           S LN SQ+ AVL  +   +++AGAGSGKT VLT R+++L+ S    P  IL + F   AA
Sbjct: 5   SLLNESQRAAVLHTNGPAMIIAGAGSGKTRVLTYRIAHLI-SQGVDPFNILALTFTNKAA 63

Query: 258 QEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLK 317
           +EM  R++  IG EA+ + + TFH +  RI+ R E   +                     
Sbjct: 64  KEMRHRIEKVIGNEAKNIWMGTFHSVFSRIL-RAEADKI--------------------- 101

Query: 318 RHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKEL 377
                P +F  +    +K  I  +  +  L   +  P ++  L +      ++   K+ +
Sbjct: 102 ---GYPKSFTIYDSDDSKTLIRNIVKEMNLDDKLYKPNVV--LGRISSAKNKLISVKQYI 156

Query: 378 QERLVDHDDYPRLNSELSLCWPCYQA--WQQMLKDQNQIDFNIMITRATEYVEKGKFRSP 435
            + ++  DD   +  ++   +  YQ+  ++    D + + FN  +          K++  
Sbjct: 157 NDPVIQADDEAAMRPKIGKIYEMYQSRCFRAGAMDFDDLLFNTNVLFKDHPDALNKYQHI 216

Query: 436 WKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTGFASR 495
           + ++MVDEYQD +  +  + + L  +NQ   N+  VGDD QSIY F G+D+     F   
Sbjct: 217 FHYVMVDEYQDTNYSQYLITRKLAAKNQ---NIVVVGDDAQSIYAFRGADIQNILNFERD 273

Query: 496 FAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPK 531
           +    V  L+  YR    I   AN  I+ N  QL K
Sbjct: 274 YPELQVFKLEQNYRSTKNIVHAANSVIKHNQAQLRK 309



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 10/68 (14%)

Query: 598 MTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRA 657
           MT H++KG E   V I+ ++E  FP+++        LN   D     EERRLFYVA+TRA
Sbjct: 559 MTIHSAKGLEFKNVFIVGMEENLFPSQMM-------LNSRAD---LEEERRLFYVAITRA 608

Query: 658 KEKVWVTY 665
           ++K+++TY
Sbjct: 609 EKKLYLTY 616