Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score = 79.3 bits (194), Expect = 5e-19
 Identities = 83/343 (24%), Positives = 139/343 (40%), Gaps = 61/343 (17%)

Query: 198 SPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAA 257
           SPL+  Q+ A     D  LVLAG G+GKT+ L  R  +LL+   A P +I +  F   AA
Sbjct: 11  SPLDPEQRLAAEAEADSVLVLAGPGTGKTTTLVGRYVHLLEQGAA-PARIFVSTFTARAA 69

Query: 258 QEMAERLKNKI-----GLEAERLH---INTFHQLGLRIINRVEGKTVIMSPLANDSKLKQ 309
           +E+  R+  ++       +AER     I T H + LR++ R          + ++     
Sbjct: 70  EELRGRIGARLETRGGDFDAERFRRMPIGTLHGMALRLLQRHPPPGCPRFRVFDEQA--- 126

Query: 310 AWCIDWLKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLI--AWLEKQLDQL 367
             C   + RH +                         LG  V  P  +  A+ ++ +   
Sbjct: 127 --CSRVIARHRLY------------------------LGDDVRKPTDVFGAYKDRLMSPA 160

Query: 368 AQMGLSKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYV 427
           A +  +K      LV+  +              Y  +Q+ L ++   DF  +I      +
Sbjct: 161 AALAEAKVRNDATLVEAAE-------------AYGRYQRALAEEGGFDFGDLIMELVRGL 207

Query: 428 E-----KGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFA 482
           E     + +    +  +++DEYQDI+P + R+L+ L  +      L+AVGDD Q +Y + 
Sbjct: 208 EEDEAYRARIAGFFDHLLIDEYQDINPAQERMLRLLRSEG---ARLWAVGDDDQCLYAWR 264

Query: 483 GSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQN 525
            +D     GF + +    +  L   YR +  I   A   I  N
Sbjct: 265 SADPAFILGFETAWPDPALFRLSRNYRSSATIVNAAGALIGAN 307



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 599 TCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRAK 658
           T H +KG E   V++   +    P            ++S  D    EERRL YVA TRAK
Sbjct: 510 TIHGAKGLEWSAVVVAGCEADLMP------------HESSPDLE--EERRLMYVAATRAK 555