Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., DNA helicase IV (NCBI) from Escherichia coli BW25113

 Score =  400 bits (1027), Expect = e-115
 Identities = 256/698 (36%), Positives = 375/698 (53%), Gaps = 27/698 (3%)

Query: 1   MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 60
           M+L A    +    + Y +  +    + ++    E  IPF+     +  +RG+ WG L+F
Sbjct: 1   MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59

Query: 61  FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 120
              P+E V R   + G  W E + F H L AH++ W     E  S    +    ++    
Sbjct: 60  VL-PDEKVVR---LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115

Query: 121 LPSFLSHSSVEAWVAQVYADLKLMDMTLHEAQK--HLPTVFDTLLPWLLDTSATLYERNK 178
              +L+         Q+   L  + + ++  ++  +    +     WL D  +   + N+
Sbjct: 116 ENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQ 175

Query: 179 AWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQ 238
           A+ E     +   F Q ESSPLN +Q  AV+  +   LVLAGAGSGKTSVL AR  +LL 
Sbjct: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235

Query: 239 SHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIM 298
              A PEQILL+AF R AA+EM ER++ +  L  E +   TFH L L II +   K  I+
Sbjct: 236 RGEASPEQILLLAFGRKAAEEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIV 293

Query: 299 SPLANDSKLK-QAWCIDWLKRHWMTPTNFKRWQKHLAK---WPIAYLAGDDELGSHVENP 354
           S L ND+  + + +  +W K+        K W++ L +   W +         G+  ++ 
Sbjct: 294 SKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPE-------GNFWDDE 346

Query: 355 KLIAWLEKQLDQLAQMGLSKKELQERLV---DHDDYPRLNSELSLCWPCYQAWQQMLKDQ 411
           KL   L  +LD+   +       Q  ++     +     +  + L  P  +AW+  LK +
Sbjct: 347 KLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAE 406

Query: 412 NQIDFNIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAV 471
           N +DF+ +I +A   +EKG+F SPWK I+VDE+QDISPQR  LL AL +QN  Q  LFAV
Sbjct: 407 NAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNS-QTTLFAV 465

Query: 472 GDDWQSIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPK 531
           GDDWQ+IY+F+G+ + LTT F   F       LDTTYRFN +IG VANRFIQQNP QL K
Sbjct: 466 GDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525

Query: 532 TLNSFKTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYL 591
            LNS     +KAV L     ++ +LD+++      + +L+L R H+ +P  L+    R+ 
Sbjct: 526 PLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585

Query: 592 SLKLDFMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRL 649
            L++DFMT HASKG++ADYVII+ + EG   FPA  +   +++AL    +DFP AEERRL
Sbjct: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645

Query: 650 FYVALTRAKEKVWVTYN-GNGSSFVQELLNDDYPVVKQ 686
            YVALTRA+ +VW  +N  N S FV+ L N D PV ++
Sbjct: 646 MYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683