Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., DNA helicase IV from Escherichia coli ECRC62

 Score =  401 bits (1031), Expect = e-116
 Identities = 262/699 (37%), Positives = 376/699 (53%), Gaps = 29/699 (4%)

Query: 1   MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 60
           M+L A    +    + Y +  +    + ++    E  IPF+     +  +RG+ WG L+F
Sbjct: 1   MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59

Query: 61  FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 120
              P+E V R   + G  W E + F H L AH+Q W     E  S    +    ++    
Sbjct: 60  VL-PDEKVVR---LHGTEWGETQRFYHHLDAHWQRWSGEMSEIASGVLRQQLDLIATRTG 115

Query: 121 LPSFLSH---SSVEAWVAQVYADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTSATLYERN 177
              +L+    S V+  + Q  + L L    L E   +    +     WL D  +   + N
Sbjct: 116 ENKWLTREQTSGVQQQIRQAMSALPLPVNRLEEFD-NCREAWRKCQAWLKDIESARLQHN 174

Query: 178 KAWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLL 237
           +A+ E     +   F Q ESSPLN +Q  AV+  +   LVLAGAGSGKTSVL AR  +LL
Sbjct: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234

Query: 238 QSHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVI 297
               A PEQILL+AF R AA+EM ER++ +  L  E +   TFH L L II +   K  I
Sbjct: 235 ARGEASPEQILLLAFGRKAAEEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPI 292

Query: 298 MSPLANDSKLK-QAWCIDWLKRHWMTPTNFKRWQKHLAK---WPIAYLAGDDELGSHVEN 353
           +S L ND+  + + +  +W K+        K W++ L +   W +         G+  ++
Sbjct: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPE-------GNFWDD 345

Query: 354 PKLIAWLEKQLDQLAQMGLSKKELQERLV---DHDDYPRLNSELSLCWPCYQAWQQMLKD 410
            KL   L  +LD+   +       Q  ++     +     +  + L  P  +AW+  LK 
Sbjct: 346 EKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKA 405

Query: 411 QNQIDFNIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFA 470
           +N +DF+ +I +A   +EKG+F SPWK I+VDE+QDISPQR  LL AL +QN  Q  LFA
Sbjct: 406 ENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNS-QTTLFA 464

Query: 471 VGDDWQSIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLP 530
           VGDDWQ+IY+F+G+ + LTT F   F       LDTTYRFN +IG VANRFIQQNP QL 
Sbjct: 465 VGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLK 524

Query: 531 KTLNSFKTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRY 590
           K LNS     +KAV L     ++ +LD+++      + +L+L R H+ +P  L+    R+
Sbjct: 525 KPLNSLTNGDEKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584

Query: 591 LSLKLDFMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERR 648
             L++DFMT HASKG++ADYVII+ + EG   FPA  +   +++AL    +DFP AEERR
Sbjct: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644

Query: 649 LFYVALTRAKEKVWVTYN-GNGSSFVQELLNDDYPVVKQ 686
           L YVALTRA+ +VW  +N  N S FV+ L N D PV ++
Sbjct: 645 LMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683