Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., DNA helicase IV from Dickeya dianthicola ME23

 Score =  387 bits (993), Expect = e-111
 Identities = 249/696 (35%), Positives = 371/696 (53%), Gaps = 23/696 (3%)

Query: 1   MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 60
           M+L +    +    + Y +VQL    + ++    E  IPF+     ++ ++G+ WG L+F
Sbjct: 1   MELKSTALGKHLAQHPYNRVQLLNAGVNVSGDRHEYLIPFNQLLA-IRCKKGLIWGELEF 59

Query: 61  FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 120
              PE  V R   + G  W E + F   L   +Q+W     E       +    ++  + 
Sbjct: 60  EL-PENKVVR---LHGTEWQETQQFFRHLFKSWQSWSQEMSEVCKDVLQQLVDTIADRET 115

Query: 121 LPSFLSHSSVEAWVAQVYADLKLMDMTLHEAQK--HLPTVFDTLLPWLLDTSATLYERNK 178
              + S  ++      + A    + + L    +  H    +   L WL    A   + N+
Sbjct: 116 ADGWFSRQALAHVQQDIRAGFAALPLPLARLDEFDHCRDNYQRCLRWLEQGEALRQQANQ 175

Query: 179 AWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQ 238
            W E         F   ESSPLN SQ  AV+  ++  LVLAGAGSGKTSVL AR ++LL 
Sbjct: 176 RWTETILVEQNAFFDTVESSPLNPSQCQAVVNGENAVLVLAGAGSGKTSVLVARAAWLLH 235

Query: 239 SHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIM 298
              A  +QILL+AF R AA EM  R++ +  L  + +   TFH L L II +   K  ++
Sbjct: 236 RAEASAQQILLLAFGRQAADEMNSRIRER--LHTDEVQAKTFHALALHIIQQCSRKAPVI 293

Query: 299 SPLANDSKLKQAWCIDWLKRHWMTPTNFKRWQ-KHLAKWPIAYLAGDDELGSHVENP--- 354
           S L  D   ++A+ I    +HW    + K+ Q K   +W    L      G+  ++    
Sbjct: 294 SRLETDGAHRRAFLI----QHWQQQCDEKKTQAKGWRQWLTEELEWTLPEGNFWQDAAIA 349

Query: 355 -KLIAWLEKQLDQLAQMGLSKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQ 413
            +L   LE+ L  +   G ++ E+   L D +  P     L L  P  +AW++ LKD+  
Sbjct: 350 SRLAGRLERWLGLMRMQGGTQSEMLA-LADDETRPLFQQRLRLMAPLLKAWKKALKDEGA 408

Query: 414 IDFNIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGD 473
           +DF+ +I +A  +++KG+F SPW+ I+VDE+QDISPQR RLL AL  Q     +LFAVGD
Sbjct: 409 VDFSGLIHQAVNFLDKGRFVSPWRHILVDEFQDISPQRARLLDALRRQIPDS-SLFAVGD 467

Query: 474 DWQSIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
           DWQ+IY+F+G+++ LTT F   F       LDT YRFN +IG +A+RFIQQNP QL K L
Sbjct: 468 DWQAIYRFSGAELTLTTTFERHFGEGAQCVLDTIYRFNHRIGDIASRFIQQNPAQLKKAL 527

Query: 534 NSFKTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYLSL 593
           NS +   +K+V+L     +E +LD+++        +L+L R H+ +P+ L+  Q R+  L
Sbjct: 528 NSLRDGNKKSVVLLAQEQLEALLDKMSGYVTTQARILVLARYHHLRPDALEKAQTRWPHL 587

Query: 594 KLDFMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRLFY 651
            LDFMT HASKG++ADYVI+L + EG+  FPA  +   L+  L    + FP AEERRL Y
Sbjct: 588 HLDFMTIHASKGQQADYVIVLGLHEGRDGFPAPPRESVLEAVLLPQPEPFPDAEERRLLY 647

Query: 652 VALTRAKEKVWVTYNGNGSS-FVQELLNDDYPVVKQ 686
           VALTRAK +VW+ Y+ +  S FV +L     P+ ++
Sbjct: 648 VALTRAKHQVWLLYDRDEPSVFVDDLHQLGVPIQRK 683