Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  116 bits (290), Expect = 4e-30
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 44/342 (12%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q+ AV   +   +++AGAGSGKT VLT R+++L+++    P QIL + F   AA E
Sbjct: 7   LNPPQREAVEHTEGPLMIIAGAGSGKTRVLTFRIAHLIRAKNVDPFQILALTFTNKAASE 66

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLKRH 319
           M  R++  IGLEA    + TFH +  +I+ RVE + +                       
Sbjct: 67  MRNRIERLIGLEARNTWMGTFHSIFAKIL-RVESEKLGF--------------------- 104

Query: 320 WMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKELQE 379
              P+NF  +    +K  I  +  +  L   V  P  +      L +++  G   + +  
Sbjct: 105 ---PSNFTIYDTDDSKSLIKSIVKEKRLDDKVYKPNTV------LSRIS--GAKNRLISW 153

Query: 380 RLVDHDDYPRLNSELSL---CWPCYQAWQQMLKDQNQIDFNIMITRATEYVEK-----GK 431
               +D Y + + E ++       Y+A+Q+ L   + +DF+ ++               K
Sbjct: 154 ENYINDPYIKADDEAAMKPRMGEIYRAYQKRLFKSSAMDFDDLLFNTNVLFRDHPDVLNK 213

Query: 432 FRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTG 491
           ++  +++++VDE+QD +  +  + + L   +Q   N+  VGDD QSIY F G+D+     
Sbjct: 214 YQQRFRYVLVDEFQDTNLSQYLITKKLAAVHQ---NICVVGDDAQSIYAFRGADIQNILN 270

Query: 492 FASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
           F   +    V  L+  YR    I   AN  I++N  QL K +
Sbjct: 271 FEKDYPDLHVVKLEQNYRSTKNIVEAANSIIEKNKAQLKKNV 312



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 10/68 (14%)

Query: 598 MTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRA 657
           MT H+SKG E   V ++ ++E  FP+++        + QS +D    EERRLFYVA TRA
Sbjct: 559 MTIHSSKGLEFRQVFVVGLEEDLFPSQM--------MMQSREDLE--EERRLFYVATTRA 608

Query: 658 KEKVWVTY 665
            EK++++Y
Sbjct: 609 MEKLYLSY 616