Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., ATP-dependent DNA helicase Rep from Acinetobacter radioresistens SK82

 Score =  107 bits (266), Expect = 2e-27
 Identities = 105/347 (30%), Positives = 158/347 (45%), Gaps = 43/347 (12%)

Query: 197 SSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDA 256
           +S LN  Q  A+       LVLAGAGSGKTSV+T +++YL+Q       +I  + F   A
Sbjct: 4   ASQLNNKQLEAMKYTQGPLLVLAGAGSGKTSVITRKIAYLIQQCRIPAHRITAMTFTNKA 63

Query: 257 AQEMAERLKNKIGL-EAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDW 315
           A+EM ER+   +   E + L ++TFH  GL ++ R+E K    +PL N+  +  A   D 
Sbjct: 64  AREMKERVGKLLSREEIKGLSVSTFHTFGLNML-RLELKN---TPLKNNFSILDA---DD 116

Query: 316 LKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKK 375
            KR  M                   L   D L S  E+ +LIA   K++       +  +
Sbjct: 117 CKRILMD------------------LMHRDNL-SGAESKELIAKAMKKISDWKNDLILPE 157

Query: 376 ELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYV-EKGKFRS 434
           +        +D    +         YQ +++ L+  N +DF+ +I   T  + E  + R 
Sbjct: 158 QAHSTCETPEDVQMAH--------LYQLYERNLRAYNAVDFDDLIVMPTRLLQENAEVRD 209

Query: 435 PW----KFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTT 490
            W    ++++VDEYQD +  +  L++ L     GQ    AVGDD QSIY + G+  +   
Sbjct: 210 KWQNRVRYLLVDEYQDTNTAQYILVKLLVGV-MGQ--FTAVGDDDQSIYAWRGAKPENMA 266

Query: 491 GFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSFK 537
                F +  V  L+  YR   +I   AN  I  NPH   K L S K
Sbjct: 267 LLQQDFPNLKVIKLEQNYRSTSRILKSANAVIANNPHIFDKQLWSDK 313



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 11/71 (15%)

Query: 594 KLDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVA 653
           K++ +T HA+KG E  YV ++ ++E   P      H +   +++ +     EERRL YV 
Sbjct: 560 KVNLLTLHAAKGLEFPYVYMIGLEEELLP------HKNSIASETIE-----EERRLMYVG 608

Query: 654 LTRAKEKVWVT 664
           +TRA++ + +T
Sbjct: 609 ITRARQALTLT 619