Pairwise Alignments

Query, 349 a.a., TMAO reductase system periplasmic protein TorT from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., periplasmic sensory protein associated with the TorRS two-component regulatory system from Escherichia coli BL21

 Score =  241 bits (616), Expect = 2e-68
 Identities = 138/306 (45%), Positives = 194/306 (63%), Gaps = 14/306 (4%)

Query: 40  LPAAAAEKLCALYPHLKDSYWLSVNYGMVEEARKLNLNLRVMEAGGYPNHHKQQQQIALC 99
           L A  A KLCALYP LKDSYWLS+NYGM E AR+  ++L+V+EAGGY     QQ QI  C
Sbjct: 39  LKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQC 98

Query: 100 VRWGADAILLGTVSPELYQDDLAHYTRSVPVFATVNQLRLNEQQQEHLKGEVGVDWYWMG 159
            +WGA+AILLG+ +      DL     S+PV   VN +         +K  VGV W+ MG
Sbjct: 99  KQWGAEAILLGSSTTSF--PDLQKQVASLPVIELVNAI-----DAPQVKSRVGVPWFQMG 151

Query: 160 FYAGEYLAR-KHPKGSGEIKIVVLPGPASSGGTKPVLQGLEEAISHSDVRITEILWADND 218
           +  G YL +  H K    + ++++PGP ++GG+K +++G   AI+ S VRI +I   DND
Sbjct: 152 YQPGRYLVQWAHGK---PLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDND 208

Query: 219 KELQRNLIQQALEQ-PDVRYLVGSAVAIEAAISELRSLNKSDQIGLIATYLSHGVYRGLL 277
            E+QRNL+Q+ LE+ P++  + G+A+A EAA+ E R+L     + +++ YLSH VYRGL 
Sbjct: 209 IEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNL--KTPLTVVSFYLSHQVYRGLK 266

Query: 278 RGRVEFAPTDQMVEQGRLSVRQAAAFLRNKPYAIQQAPKIEALTPQHLERKIIADSLSPS 337
           RGRV  A +DQMV QG L+V QA   L+ +  +   +P I  LTP++ +R+ I  SLSP 
Sbjct: 267 RGRVIMAVSDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPG 326

Query: 338 EYRPVF 343
            +RPV+
Sbjct: 327 GFRPVY 332