Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (645), Expect = 5e-71
 Identities = 157/425 (36%), Positives = 239/425 (56%), Gaps = 31/425 (7%)

Query: 346 GLVIVVWIVWKVVYRSVIQ----RLDQHTAALLS-VAKGQLDVDVSTQGNDELGQMGQAI 400
           GLV+V+ I+   V+ S +     R   H   ++  + +G LDV +  + + EL  +    
Sbjct: 179 GLVLVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTL---- 234

Query: 401 AHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKAR 460
                  K +  +A S       L ++   ++  ++Q T  L E   +L  + +    A+
Sbjct: 235 ------KKGINAMAVS-------LSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAK 281

Query: 461 QQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLLA 520
           ++A++A+R KS FLA MSHE+RTP+NGV+G  R +  T LT++Q  Y+Q I +S  +LL 
Sbjct: 282 KRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLT 341

Query: 521 ILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQ 580
           I+ND+LD+SK+EAG L + +  F+   ++ E   L  + A EKG+ +T  ID  + +   
Sbjct: 342 IINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVV 401

Query: 581 GDEIRIGQVLNNLVGNGIKFTDQGEVRIRIR---LAPDGQGIRFAVEDSGIGIAEEEQAT 637
           GD +RI QVL NLVGN IKFT++G + + +    L  D   ++F V D+GIGI+E +QA 
Sbjct: 402 GDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQ 461

Query: 638 LFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVGEP 696
           LF AF+QADA   R+ GGTGLGL I++KLV  MGGE+ L S+L QGS FWFTL L   E 
Sbjct: 462 LFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTEL 521

Query: 697 VETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDI 756
                   D +   ++LL+E N     + Q  L   G +VT   ++ E     +Q  +D 
Sbjct: 522 PLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPE-----EQHVYDY 576

Query: 757 ALLDI 761
            LL++
Sbjct: 577 VLLNL 581



 Score = 75.9 bits (185), Expect = 1e-17
 Identities = 68/253 (26%), Positives = 109/253 (43%), Gaps = 15/253 (5%)

Query: 700 PALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALL 759
           P    D +P+  V+ V+DN  N  +    L      V    S QEA    Q ++FDI L+
Sbjct: 656 PKPQADKLPLC-VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILM 714

Query: 760 DIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVK 819
           DI +P  +GV   + ++Q++        P IAV+AH    E    L AG D YL KP+ +
Sbjct: 715 DIQMPHMDGVTACKAIKQLKGYRDT---PVIAVTAHAMAGERDRLLKAGMDDYLTKPIEE 771

Query: 820 EQLAAMLRQQLTAKSGDDADMR-DKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMD 878
                +L+Q L   S      +  K    D +++  N  P   P+ EA     +W   + 
Sbjct: 772 H----ILQQVLVHWSPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAII---DWPVALR 824

Query: 879 HAKFEQDVQILGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWL 938
            +  ++D   L  E +  +V Y  +         E E    + +    HKL GS     +
Sbjct: 825 QSANKED---LAKEMLGMLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGV 881

Query: 939 TQLYQLCQQIEKA 951
            +L ++C  +E+A
Sbjct: 882 PRLRKICASLEQA 894