Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1220 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  272 bits (696), Expect = 9e-77
 Identities = 183/529 (34%), Positives = 282/529 (53%), Gaps = 41/529 (7%)

Query: 459  ARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSL 518
            A++ AE A+ AK+ FLA MSHEIRTPMN V+G   LL D+ L   Q+ ++  + ++ RSL
Sbjct: 646  AKEVAELAAAAKTTFLANMSHEIRTPMNAVIGFTELLLDSVLNEQQRRHLGTVRQAARSL 705

Query: 519  LAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQY 578
            L +LND+LD +K+E G +E+ +    L  L ++  + ++  A  KG++L+    E +  Y
Sbjct: 706  LGLLNDILDTAKLERGAVELENRDLSLRELCAQVCDSLRLGAEAKGLSLSLDYQESLGDY 765

Query: 579  WQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGIRFAVEDSGIGIAEEEQATL 638
            ++GD +RI QVL NLVGN +KFT+ G VR+ +   P GQ + FAV DSGIGIAE+    +
Sbjct: 766  FKGDSLRIQQVLTNLVGNAVKFTESGWVRLEVSGVP-GQ-VHFAVRDSGIGIAEDRLQHI 823

Query: 639  FDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVG-EP 696
            FD F QADA   R+ GGTGLG  I+R+L + MGG + + S+LG GS F   LPL  G E 
Sbjct: 824  FDPFAQADASMSRRFGGTGLGTTIARQLTELMGGSITVESRLGAGSVFHVQLPLQAGVEQ 883

Query: 697  VETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDI 756
            +   + A   +P  N+L  +D   N  +    L +LGH+VT A   ++A   F   RFD+
Sbjct: 884  LSERSGAERLLPALNILAADDVAQNIELLSLTLGALGHRVTTAGDGEQALAAFVGGRFDV 943

Query: 757  ALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKP 816
             L+D+ +P  +G++  R +R+ E +      P IA++A V  ++      AG DG+  KP
Sbjct: 944  LLMDVQMPRMDGLEATRRIRRHEQAHGLRATPIIALTASVLEQDRRAAREAGMDGFASKP 1003

Query: 817  LVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAV 876
            L  ++L A + + +       A   ++A + D S+      P+G                
Sbjct: 1004 LEMDKLLAEIARVIGL-----APTVEQAAAVDVSADLAIDWPRG---------------- 1042

Query: 877  MDHAKFEQDVQILGVEK-----MREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKG 931
                     +Q+ G ++     +R  +      CAE   L + +   +A I+   H+L+G
Sbjct: 1043 ---------IQLWGSQQAMAAAIRRFLDEHAGSCAEVAGLLQ-DNHREAAIE-LVHRLRG 1091

Query: 932  SAGALWLTQLYQLCQQIEKADSPAAAYQQTPLVDAVENAKQALRNALDL 980
            +AG L L +  +L  Q+E A   A       L+ A++ A  AL   L L
Sbjct: 1092 AAGNLALLRASRLAGQLEHALKGAIPASVDDLLAALQAALAALPVELPL 1140