Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1117 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  240 bits (612), Expect = 4e-67
 Identities = 154/402 (38%), Positives = 226/402 (56%), Gaps = 17/402 (4%)

Query: 458 KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 517
           +A++ AE  +R KS FLATMSHEIRTPMNGV+G   LL DT L+  Q+H+ + I  SG S
Sbjct: 468 EAKEAAEAGNRTKSEFLATMSHEIRTPMNGVIGMTGLLLDTRLSEEQRHFAETIRDSGES 527

Query: 518 LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 577
           LL ++ND+LD+SK+EAG L++ +T F+L  LV    +++  RA  KGI +   ID  +  
Sbjct: 528 LLTVINDILDFSKMEAGKLDLDYTEFELVPLVESVVDILAPRAHAKGIEIASLIDPRLRM 587

Query: 578 YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRL--APDGQGI-RFAVEDSGIGIAEEE 634
             + D  R+ QVL NL GN +KFT++G V I + L   PD   + RF V D+GIGI  E 
Sbjct: 588 LVRSDPGRLRQVLMNLGGNAVKFTEKGGVSIEVSLLDGPDAPAMARFDVRDTGIGIPPEA 647

Query: 635 QATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPV 693
           Q  LF  F+Q DA   R+ GGTGLGLAISR+L + MGGE+ + S +G+GS FW TLPL +
Sbjct: 648 QGRLFSMFSQVDASTARRYGGTGLGLAISRRLAELMGGEVGVESAVGRGSRFWITLPLEL 707

Query: 694 GEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSV-----QEAKLC 748
             P    + A  D+    VL+V+DN VNC V +  L + G +V           +  +  
Sbjct: 708 LAP---QSAAPPDLSGHRVLVVDDNPVNCDVIERQLRAFGVEVHACLDAGSGMGELTRAA 764

Query: 749 FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
                +++A++D  +P   G +++R +  +       ++  +  S  +  ++  G  A  
Sbjct: 765 AMGTPWEVAVVDSQMPVVTGSEMVRMIHAIPMLAGTRIV--VTSSQGMPADQNDGQPA-- 820

Query: 809 FDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTS 850
            D +L KPL +  L   + + L   +G      D AE +  S
Sbjct: 821 IDAFLHKPLRQSTLLDTIGRVL-GLTGPAERPADHAEEYKAS 861



 Score = 77.4 bits (189), Expect = 5e-18
 Identities = 70/290 (24%), Positives = 125/290 (43%), Gaps = 36/290 (12%)

Query: 696  PVETPALAVDDVPVAN-------VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLC 748
            P E PA   ++   +        +L+ EDN VN  VA G L  LGH V +     EA   
Sbjct: 847  PAERPADHAEEYKASEPAAKRLRILVAEDNPVNQQVALGLLRKLGHTVDVVGDGAEALEA 906

Query: 749  FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
             +   +D+ L+D+ +P+ +G++  R +R +   +  A +P +A++A+    +      AG
Sbjct: 907  VRLLPYDVVLMDVQMPEMDGLEATRAIRAL--PLAAAQVPIVAMTANAMRGDDQMCFDAG 964

Query: 809  FDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQA 868
             DGY+ KP+ + +LA  L +   A     A                  +P   P   ++A
Sbjct: 965  MDGYISKPIDRHKLAEALAKYSGAPETKPA------------------EPPAAPQ-NSKA 1005

Query: 869  VRKEWVAVMDHAKFEQDVQILGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHK 928
            V ++ +  +  A  E D  +  + K  E     +   A      + E+     ++ +AH 
Sbjct: 1006 VDRDVLDAL-AADIEADTVVEILVKFMEDARTRQNNAAALAPTGDLEK-----VRREAHT 1059

Query: 929  LKGSAGALWLTQLYQLCQQIEKADSPAAAYQQTPLVDAVENAKQALRNAL 978
            +KG+A +L L  +   C  +E+A    A  +  P +D +    +AL   L
Sbjct: 1060 IKGAAASLGLLAVRDACLALEQA--ARAGGEVAPQIDRLHQDIEALPGLL 1107