Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1248 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  246 bits (629), Expect = 5e-69
 Identities = 156/416 (37%), Positives = 230/416 (55%), Gaps = 25/416 (6%)

Query: 457  AKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGR 516
            A+A+  AE A+R KS FLA MSHEIRTPMN ++G A L   T L   Q+ YV+ I +SG+
Sbjct: 707  ARAKDAAEDAARTKSDFLANMSHEIRTPMNAIIGMAHLALKTDLDPRQKDYVRKIQQSGQ 766

Query: 517  SLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVT 576
             LL I+ND+LD+SKIEAG LE+  T   L +++     L+  +A  KG+ L + +   V 
Sbjct: 767  HLLGIINDILDFSKIEAGKLEVEATEIHLDKVLENVGNLISEKATAKGLELLFDVGAGVP 826

Query: 577  QYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPD---GQGIRFAVEDSGIGIAEE 633
                GD +R+GQVL N   N +KFT+ GE+ + +RL  D      +RF V D+GIG+ +E
Sbjct: 827  LDLMGDALRLGQVLINYANNAVKFTEAGEIVVAVRLMEDLGPDVMLRFEVRDTGIGLTDE 886

Query: 634  EQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLP 692
            ++A LF +F+QAD    RK GGTGLGLAIS+KL + MGG + + S  GQGS FWFT  L 
Sbjct: 887  QKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGVDSVPGQGSTFWFTARLG 946

Query: 693  VGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTL----AKSVQEAKLC 748
             G+P   P +   ++    +L+V+DNE    V    L+++  +V      AK++   +  
Sbjct: 947  KGKP-RAPLIPEAELQGRRMLVVDDNENARAVLVDMLSAMSFEVDAVDSGAKALDAIRDA 1005

Query: 749  FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPF----IAVSAHVFNEEVAGY 804
                 +D+  LD  +PD +G+       ++ + IH+  +PF    I V+A+   E + G 
Sbjct: 1006 VLDLPYDVVFLDWQMPDMDGL-------EVAEQIHSIRLPFPPHLIMVTAYGREEIIKGA 1058

Query: 805  LAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTSSIFDNGQPQG 860
             AA     L KP+     AA+    +   + D    RD+AE        D+   +G
Sbjct: 1059 QAADIGEVLIKPV---SPAALFDSIMRVFASD--QRRDEAEDVSEGGSVDHAALRG 1109



 Score = 49.3 bits (116), Expect = 2e-09
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
            VLLVEDN++N  VA   L   G +V +A +   A    +   +D+ L+D+ +P  +GV  
Sbjct: 1112 VLLVEDNDLNQEVAGEILRDAGIEVEIADNGLIAVEKARAGVYDLILMDMQMPVMDGVTA 1171

Query: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831
             R++R+    + +  +P IA++A+    +    L AG + ++ KP+  + + + + +   
Sbjct: 1172 TREIRR----LGHVDLPIIAMTANAMQADRDKCLEAGMNDHIAKPIDPDTMFSTISRWCA 1227

Query: 832  AK 833
            A+
Sbjct: 1228 AE 1229