Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1196 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  243 bits (619), Expect = 7e-68
 Identities = 160/386 (41%), Positives = 221/386 (57%), Gaps = 17/386 (4%)

Query: 447 HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 506
           HK  +  L  A+A++ AE+AS+AKS FLATMSHEIRTPMNGVL  A+LL+D  L + Q+ 
Sbjct: 515 HKEEEAAL--AEAKKVAEEASQAKSLFLATMSHEIRTPMNGVLTMAQLLEDMPLPAEQRE 572

Query: 507 YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 566
             +VI  S  SLL I+ND+LD+SKIEA  L++      L  +V    +L+  RA+EKGI+
Sbjct: 573 MARVIRDSATSLLTIINDILDFSKIEADKLQLELVDLSLSEVVEGVADLLTIRAQEKGIS 632

Query: 567 LTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIR-LAPDGQGIR--FAV 623
           L   +D  +T    GD IR+ Q++ NL GN IKFTD+G VRI +R L P  + +R  F++
Sbjct: 633 LITFVDPALTDMVVGDPIRLRQIITNLAGNAIKFTDKGYVRIAVRALDPRERPLRLEFSI 692

Query: 624 EDSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQG 682
            D+GIG+  E+QA LF+ F QAD    R+ GGTGLGL+I R+LV  MGGE+ + S +GQG
Sbjct: 693 TDTGIGLDSEQQARLFEPFMQADITISRRYGGTGLGLSICRRLVAMMGGEIGVRSNVGQG 752

Query: 683 SCFWFTLPLPVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSV 742
           S FWF +PL   EP E  A    D+    VL++ +  V     + +L  LG QV +  S 
Sbjct: 753 STFWFQVPL---EPAEVEAEPPLDLSGIAVLVLAEGPVAAECLRQYLGHLGAQVAVVASA 809

Query: 743 QEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIP------FIAVSAHV 796
           + A    +         D+ L DG     LR    +  ++  A  P       + V+   
Sbjct: 810 EGAVAAVRAAALAGWTYDVALLDGGQDFRLR--LGVAGALMTAAGPDLELKVAMLVAQDA 867

Query: 797 FNEEVAGYLAAGFDGYLPKPLVKEQL 822
           F    +   AAG    LPKP+ + QL
Sbjct: 868 FAAVASEVKAAGLYAVLPKPIRRRQL 893



 Score = 67.8 bits (164), Expect = 4e-15
 Identities = 91/433 (21%), Positives = 184/433 (42%), Gaps = 69/433 (15%)

Query: 8   IGRKLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQIIA 67
           I  KL+ +   +A ++++++L+    +S + +    V    +PS+  A +++E + ++ A
Sbjct: 31  IRAKLVVAVGTVAGMIMVASLLTWFSYSEIERLLAAVTRTNLPSLSNALKLSEATARLAA 90

Query: 68  SVQTLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGEEAFDSVLLDRLEQDVQNVIDTLA 127
           +   L  ++++ + Q+    +  Q E LL  +  L     D+  ++ L   +    D + 
Sbjct: 91  AAPALDGSQSQFQRQSNFVALQQQTERLLALVDHLAGSIGDAGRVEELRSMIAAFADNVV 150

Query: 128 QLGRRVEHRLTLESQLSTSVKEMRKLAQELEQLTRTQVLNTSTIAIANVTHIYDLLQKQQ 187
                V+ RL L        +  R  A+ + QL                           
Sbjct: 151 DRNILVDKRLQL-------AERSRAQAEIISQL--------------------------- 176

Query: 188 QAQVYQALDNLVEVDLDLAERLHELHLLAFKVL--NEIEETQTVTDLERILALDSEFAAN 245
             +V++A+  LV    D A        LA  VL  N + ET    +LE++  L + +   
Sbjct: 177 DVEVHRAMGGLVG---DPA--------LATVVLASNYLRETVVAGNLEKVGDLRAAYEEQ 225

Query: 246 LSIMQRRVQAVEDPTR-----SKQMVSLLRGLEKRRIVFELLKQRYSNEQAAQQLLHDTL 300
           +  +   V A    T      ++++++L  G E    VFEL   +            +  
Sbjct: 226 VRYLAELVDASGARTPRTRDLTRRVLALGTGPEN---VFELRTLQMLTIARLAAANDEGR 282

Query: 301 TQFAKLNNTVNQLVDASN-------QVTTAAVSKLSNTLYDAQLILTVLGLLGLVIVVWI 353
              A+ +++V +LV A+        + T AAVS    T+    L++ +L   G ++ +W+
Sbjct: 283 DLVARTSSSVGRLVSAAEAEAAENERRTEAAVSSGRTTM----LVVAMLTFFGPLLFIWL 338

Query: 354 VWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVSTQGNDELGQMGQAIAHARDTAKALKVV 413
               + RSV+ RL    +++ ++A+G     +  QGNDE+  M   +A  RD    L+  
Sbjct: 339 Y---LGRSVVARLAGLASSMHAIAEGDFQAPIPGQGNDEITDMAAELAVFRDAMAKLQES 395

Query: 414 AESEVLAKRELQQ 426
           +E+ + ++R L++
Sbjct: 396 SEALIESERRLRR 408



 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 14/264 (5%)

Query: 710  ANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGV 769
            A +L+ EDN  N +V +  +  LG+ + +  +  EA    Q + + + L D H+P+ +G 
Sbjct: 933  ALILVAEDNPTNKVVIRHLMERLGYAIEVVGNGTEAWERMQIRDYGLLLTDCHMPEMDGY 992

Query: 770  DLLRDLRQME-DSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQ 828
            +L + +R+ E ++ H+  +P +A++A          L +G + +L KP+   QL + +R+
Sbjct: 993  ELTQRIREWEVETGHD--LPIVALTADALAGTARRCLDSGMNAFLAKPIDLVQLDSTIRR 1050

Query: 829  QLTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQI 888
             L    G     R        ++      P   P  EA       + V+D     Q    
Sbjct: 1051 LLPTAVG--LRRRRSGGGEGAAAPLPAAIPVAPPKDEA------LLPVLDLTPMRQIFGD 1102

Query: 889  LGVEKMREIVGYFEQGCAEFFA-LCEAERDNDA-QIKSQAHKLKGSAGALWLTQLYQLCQ 946
            +G +++RE++  F          L +A +  DA   +  AH  KG+  +    +  +LC 
Sbjct: 1103 IG-DEVRELLALFVDTTRPLVVDLGDALQAGDALAAREAAHSAKGAGNSAGAFRFAKLCA 1161

Query: 947  QIEKADSPAAAYQQTPLVDAVENA 970
            + E A + +       L  A+E A
Sbjct: 1162 EAEAASAASDLATVLALYPALEGA 1185