Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1616 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  236 bits (601), Expect = 1e-65
 Identities = 148/405 (36%), Positives = 221/405 (54%), Gaps = 17/405 (4%)

Query: 458  KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 517
            +A++ AE A+R KS FLA MSHEIRTPMN ++G + L   T LT  Q  YV+ I  +G+ 
Sbjct: 874  RAKELAEDATRMKSDFLANMSHEIRTPMNAIIGMSHLALKTELTPRQHDYVKKIQSAGQH 933

Query: 518  LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 577
            LL I+ND+LD+SKIEAG L + HT F+L +++     L+  + R K + L + I  +V +
Sbjct: 934  LLGIINDILDFSKIEAGKLAVEHTDFELDKVLDNIANLLTEKTRAKSLELVFDIPSEVPR 993

Query: 578  YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQG---IRFAVEDSGIGIAEEE 634
               GD +R+GQ+L N   N +KFT+ GE+ I  R+    +    + FAV D+GIGI  E+
Sbjct: 994  TLVGDSLRLGQILINYANNAVKFTENGEIDIIARVKERSETEVLLYFAVRDTGIGITAEQ 1053

Query: 635  QATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPV 693
             A LF +F QAD    RK GGTGLGLAIS++L + MGGE+ + S+ G+GS FWFT  + +
Sbjct: 1054 AARLFQSFEQADTSTTRKFGGTGLGLAISKRLAELMGGEVGVESEYGKGSTFWFTARMGI 1113

Query: 694  GEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEA-----KLC 748
            G   +   L   D+    VL+V+DN+    V    +  +  QVT   S  EA     +  
Sbjct: 1114 GTVRKRRLLPSPDLRGRRVLVVDDNDNARTVLADLMAGMTFQVTTRASGLEAVDEVKRAA 1173

Query: 749  FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
                 ++I LLD  +P  +G++    L  +     +     + V+A+   E +     AG
Sbjct: 1174 MAGTPYEIVLLDWRMPGMDGIETAHHLMALG---LDPAPRLLMVTAYGREEVLNLITEAG 1230

Query: 809  FDGYLPKPLVKEQLAAMLRQQLTAKSG-DDADMRDKAESHDTSSI 852
             +  L KP+     A++L   +    G   A+ RD    H +S +
Sbjct: 1231 IEDVLIKPV----SASILFDTIMRLFGCQPAEPRDVDGGHSSSEM 1271



 Score = 70.9 bits (172), Expect = 7e-16
 Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 20/271 (7%)

Query: 710  ANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGV 769
            A +LLVEDN++N  VA   L   G QV +A     A    ++  +D+ L+D+ +P  +GV
Sbjct: 1279 ARILLVEDNDLNQQVATELLGDAGFQVDVADDGAIALAKVRRNAYDMVLMDMQMPVMDGV 1338

Query: 770  DLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQ 829
               R++R++    H   +P +A++A+    +    L AG + ++ KP+  +QL A L + 
Sbjct: 1339 AATREIRRLGQFDH---LPIVAMTANAMQRDRDRCLDAGMNDFITKPIDPDQLWAALLRW 1395

Query: 830  LTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQIL 889
            +       A     A +H  S+  + G+    P       R + +      +  Q    L
Sbjct: 1396 I-------APRHSPAAAHGASAPSETGEEHSIP-------RIDGLDTTTGLRRVQGKTRL 1441

Query: 890  GVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQIE 949
             +  +R+     +    +  A  EA  D+ +  +  AH  KG AG +   ++ +    +E
Sbjct: 1442 YLTSLRKFAAGRKSVAGDIRAALEA--DDWSTAERLAHTTKGLAGMIGADEVQRRAADLE 1499

Query: 950  KADSPAAAYQQT-PLVDAVENAKQALRNALD 979
             A     + Q+   L+DA+     AL  ALD
Sbjct: 1500 AALCDKLSRQEVEDLLDAMAAPLAALIAALD 1530