Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  251 bits (641), Expect = 2e-70
 Identities = 137/332 (41%), Positives = 212/332 (63%), Gaps = 13/332 (3%)

Query: 458  KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 517
            KA+  AEQAS+AKS FLA MSHEIRTP+NGV+G   L+  T L+ TQ  Y+ ++N+SG +
Sbjct: 680  KAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTDLSETQAQYLSIVNQSGNA 739

Query: 518  LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 577
            LL I+ND+LD+SKIEAG LE+     DLY L  +T +++     +KG+ +  +I  D+ +
Sbjct: 740  LLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLNIHPDIPR 799

Query: 578  YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQG-----IRFAVEDSGIGIAE 632
            +   D +R+ Q++ NL+GN  KFT++GE+ +++      +      IRF+V D+GIGI  
Sbjct: 800  FIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMVIRFSVRDTGIGIKA 859

Query: 633  EEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPL 691
            E+Q  +F+AF+Q D    +K GGTGLGL IS +L+Q M   LQL S +G+GS F+F L +
Sbjct: 860  EKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGSTFYFDLNV 919

Query: 692  --PVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCF 749
                GE +       +D+ V NVL+V+DN+ N ++ +  +   G   + AK+  EA   F
Sbjct: 920  KYEYGERITLE----EDLSVENVLIVDDNDNNRMIIERMMALRGISTSQAKNGFEAIQKF 975

Query: 750  -QQQRFDIALLDIHLPDGNGVDLLRDLRQMED 780
             + ++FD+ L+D H+P  NG++ +R +R++ D
Sbjct: 976  VEGEKFDVVLMDYHMPYMNGIETIRKIREIVD 1007



 Score = 57.4 bits (137), Expect = 6e-12
 Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 28/241 (11%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTL--AKSVQEAKLCFQQQRFDIALLDIHLPDGNGV 769
            VL+VEDN +N L+A+  + +L     +  A + +EA    + +   +  +D+ +P+ NG 
Sbjct: 1079 VLIVEDNTINMLLAKTVIHNLSPATAILEAANGKEALEVMKDELPSVIFMDVQMPEMNGY 1138

Query: 770  DLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQ 829
            +  + +R+  +  HN +I  IA++A     E    + AG + ++ KP V+E +  ++ + 
Sbjct: 1139 EATQAIRKKYNK-HNILI--IALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKW 1195

Query: 830  LTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDV-QI 888
                   D  +   +    +  +FD  + Q               AV+     E ++ QI
Sbjct: 1196 HFNDLDSDLKIHAPSSESPSKRLFDIDKFQ---------------AVLGFPDLESEMFQI 1240

Query: 889  LGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQI 948
            +      E+    E+  A F    E  ++ D  I   AHKL  +A A++L++L  L  ++
Sbjct: 1241 ILKSGKSEL----EKSEATFL---EILQNQDEGISQAAHKLYSTASAMYLSKLSTLATKM 1293

Query: 949  E 949
            E
Sbjct: 1294 E 1294