Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  221 bits (562), Expect = 2e-61
 Identities = 150/447 (33%), Positives = 240/447 (53%), Gaps = 33/447 (7%)

Query: 407 AKALKVVAESEVLAKRELQQHKEHLE----ELVEQRTCQLSE--MNHKLNQEVLNHAKAR 460
           AK  KV  E   L   +L   K+ LE    +L E+R   +       KL ++ L  AK  
Sbjct: 512 AKTGKVQTEQMTL---DLPSGKKFLEIRFFKLDEERMISVGRDVTEQKLWEKGLKEAK-- 566

Query: 461 QQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLLA 520
           + AE A+RAKS FLA+MSHEIRTPMNG+LG   LL+ T +   QQ  V+VI  SG SLL 
Sbjct: 567 EVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGLLEHTKMDDEQQSIVKVIKDSGESLLV 626

Query: 521 ILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQ 580
           I+ D+LDYSKIE G LE+  +       +++   +       K ++L   I   + Q+  
Sbjct: 627 IIKDILDYSKIEEGKLELELSSSKFREELNKVINIFSGMVVGKELSLNLDIAPTIPQWLI 686

Query: 581 GDEIRIGQVLNNLVGNGIKFTDQ-GEVRIRIRLAP---DGQGIRFAVEDSGIGIAEEEQA 636
            D  ++ Q+L N++GN +KFT + G+V I++   P       + F V+D+G+GI + +  
Sbjct: 687 LDNEKLSQILFNIIGNAVKFTPKGGDVSIKVSGEPILDKNFMLYFNVKDTGVGIPKSKID 746

Query: 637 TLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVGE 695
            L + FTQ   G   +  G+GLGLAI+ KL++ MGG LQ+ S++G+GS F FT+   + +
Sbjct: 747 QLINPFTQTGRGTAEEKSGSGLGLAIANKLIELMGGSLQIESEVGKGSEFSFTVFARISD 806

Query: 696 PVET--------------PALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKS 741
             E                   + D     +LL EDN++N    +  +  LG+ V    +
Sbjct: 807 SEEKVGKDDYEKYAKEEYKLSHISDKFPKEILLAEDNDINLKFMKLLMKQLGYSVDTVST 866

Query: 742 VQEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEV 801
            +EA    Q++R+D+  +D  +P  +G++  R++++M++  +   I  I +SA+VF E++
Sbjct: 867 GEEAVKAVQKKRYDMIFMDYQMPVMDGLEASREIKKMKEGKY---IRIIGLSANVFKEDI 923

Query: 802 AGYLAAGFDGYLPKPLVKEQLAAMLRQ 828
                AG D YL KP+  + +   +++
Sbjct: 924 ERAYEAGMDDYLTKPIKIQDVVMKIKE 950