Pairwise Alignments

Query, 459 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 91/399 (22%), Positives = 162/399 (40%), Gaps = 12/399 (3%)

Query: 29  QWQVFIGLIFGYAMFYVVRMALGVVKKPMLDAGIVTLEELGIMGSAFFFTYAFGKFLNGF 88
           +W +   + F   + Y+ R ALGV++  +      T  +   +   F   YA G  L G 
Sbjct: 33  RWGMLALVFFATTLNYIDRAALGVMQPILAKEMSWTAMDYANINFWFQVGYAIGFVLQGR 92

Query: 89  LSDYANIGRFMSFSLLLSGVASIFMGMNTVAFFFVLLWGLNGWFQSVGSAPSCVSIYQ-W 147
           L D   + R    ++LL  +A+   G+ T A  F++   + G  ++  + P+CV   + W
Sbjct: 93  LIDRVGVKRVFFCAVLLWSLATGAHGLATSAVGFMVCRFILGLTEAA-NYPACVKTTRLW 151

Query: 148 FSPKQRGSRYSIWGGSRNIGEGITWILTASLVSYFGWRAGFIGAGIAGVVASLIMFKLLK 207
           F   +R     I+    N+G  +T +L   ++  +GW+A F+     G +  L+ + L  
Sbjct: 152 FPAGERAVATGIFNAGTNVGAMMTPMLLPLILHVWGWQAAFLCMSALGGI-WLVFWGLKY 210

Query: 208 DRPQTYGMPDPGTAFEEGTEIKKANDPKETRRAQMFILKQPVVWLIALACAAMYISRYAM 267
             P+ +    P     E   + +  +P++ R     IL+    W  ALA +      +  
Sbjct: 211 FNPEDH----PSVKQSELDYVLQEAEPEQPRVPFTRILRMRGTWAFALAYSMTAPVFWFY 266

Query: 268 SSWAVLFLQEQ--KGYSLIDAGFAMSMYPTAGLAGAILSGILSD-KVFKGNRNIPNLLYG 324
             W   FL +Q   G ++   G  + +       G++  GILS   + +G  +I   L  
Sbjct: 267 LYWLPPFLNQQYNLGINVTQMGIPLIIIYLTADFGSVGGGILSSFLIGRGMNSIKARLLS 326

Query: 325 LTNIAGMCLMFFGPDNRIVDAVALSMIGFSIGGLVVFLAGL--IACDLMPKNAVGAVKGL 382
           +   A   +            VA+  I  +IG    + A +  +  D  PK+ +  V G 
Sbjct: 327 MLLFACCIVGVIMAAGSSQLWVAVFAISLAIGAHQAWTANIWSLVMDYTPKHMMSTVFGF 386

Query: 383 IGLCSYIAASAQELISASLITVTEVEGVKHYDFGNAQYF 421
            G+C+ I       I   ++TVT       +    A YF
Sbjct: 387 GGMCAAIGGMFMTQIVGHILTVTNNNYTVLFTLIPAMYF 425