Pairwise Alignments

Query, 459 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., predicted D-glucarate transporter (NCBI) from Escherichia coli BW25113

 Score = 87.4 bits (215), Expect = 9e-22
 Identities = 108/466 (23%), Positives = 187/466 (40%), Gaps = 42/466 (9%)

Query: 14  LSSSKAEMLKRYKSYQWQVFIGLIFGYAMFYVVRMALGVVKKPML-DAGIVTLEELGIMG 72
           LS + + + KR  +  W + + L    +  Y  R  L +    M  D G+  +  +G + 
Sbjct: 4   LSQAASSVEKRTNARYW-IVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVG-MGYVF 61

Query: 73  SAFFFTYAFGKFLNGFLSDYANIGRFMSFSL-------LLSGVASIFMGMNTVAFFFVLL 125
           SAF + Y  G+   G+L D     R   +S+       LL G   IF G   +   F L 
Sbjct: 62  SAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLR 121

Query: 126 WGLNGWFQSVGSAPSCVSIYQWFSPKQRGSRYSIWGGSRNIGEGITWILTASLVSYFGWR 185
           + L G  ++     +   +  WF  ++RG+  SI+  ++     I   +   L    GW 
Sbjct: 122 F-LVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS 180

Query: 186 AGFIGAGIAGVVASLIMFKLLKDRPQTYGMPDPGTAFEEGTEIKKANDPKETRRAQMFIL 245
             F   G  G+V S I  K++ +  Q  G+      +          D + T+    F +
Sbjct: 181 HVFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELEYIAAGGALINMDQQNTKVKVPFSV 240

Query: 246 K--QPVVWLIALACAAMYISRYAMSS-------WAVLFLQEQKGYSLIDAGFAMSMYPTA 296
           K  Q    L +     +YI +Y +++       W  ++L + +G S++ AGF  S+    
Sbjct: 241 KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC 300

Query: 297 GLAGAILSGILSDKVFK--GNRNI----PNLLYGLTNIAGMCLMFFGPDNRIVDAVALSM 350
           G  G +L GI+SD + +  G+ NI    P ++  L ++  +   +   +  I+  +AL+ 
Sbjct: 301 GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF 360

Query: 351 IGFSIGGLVVFLAGLIACDLMPKNAVGAVKGLIGLCSYIAASAQELISASLITVTEVEGV 410
            G  IG     L   +  D  PK   G   GL  +   I+     +    ++  T     
Sbjct: 361 FGKGIGA----LGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTG---- 412

Query: 411 KHYDFGNAQYFWLAAGVVSVLLALTVWNAKKVVDIDEAEGKPLKTQ 456
               F  A  +     +++VL  L +     V DI   E KP+  Q
Sbjct: 413 ---SFNGALIYVGVHALIAVLSYLVL-----VGDIKRIELKPVAGQ 450