Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  172 bits (435), Expect = 7e-47
 Identities = 103/253 (40%), Positives = 151/253 (59%), Gaps = 6/253 (2%)

Query: 527 LREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYL 586
           L  + R+L+ EV ER+  EA L+  Q ELIQ AK+AVVGQTMT+LAHE+NQPL+A+S YL
Sbjct: 411 LNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYL 470

Query: 587 FSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQ 646
           F+A  A+E+    Q   +L   E L  R+  I+ SLR F R+   +  L PV L      
Sbjct: 471 FTAGRAIEQGQSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVA 530

Query: 647 ALVLVQTKAKRQQIKLINTLP-DDLMVMADALSLEQVLINLIVNGCDASTTFAQPWVKLI 705
           A  L+  + + +Q  L  +LP D + V  D + ++QVL+N++ N  DA +  A   V  +
Sbjct: 531 AWELLAMRHQSRQGAL--SLPTDTVWVSGDEVRIQQVLVNVLANALDACSHDA---VIAV 585

Query: 706 ALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRIAL 765
              T+     + + D+G G+   ++  L  PFTT+K VGLG+GLSI  SL+ +M+G + L
Sbjct: 586 TWQTQGEALEVYIADNGPGWPVALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMKGDLRL 645

Query: 766 ASNLEKGAMVILE 778
           AS L + A V+L+
Sbjct: 646 ASTLTRNACVVLQ 658



 Score = 77.8 bits (190), Expect = 2e-18
 Identities = 80/395 (20%), Positives = 167/395 (42%), Gaps = 37/395 (9%)

Query: 16  AFAFSTSLLTIVSLVAWGTWSRLDYQVAELLNQSVPKYNTSYVLETRSS-EIRRRIQLIV 74
           AF     L  IVS+V+  +W     QV   L++  P+ ++++++E   +  + +  + ++
Sbjct: 21  AFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLL 80

Query: 75  SATSKVTLNQQYQRLQ--EDFTAIHAALASLPQNEQQAALQQGYTELRQTTQQINDLVSA 132
           +  + V L  + Q +Q  +    +   L    + +    LQ   T L +    + ++   
Sbjct: 81  APNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLV 140

Query: 133 RIDVDRRLALFAEQLDWLHQDIGMELSPMRQELQWQ------------------LERGGA 174
           R     +++  + ++DWLH D   EL+ + Q+  WQ                  L+R   
Sbjct: 141 R----EKVSELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQIEANQGDAAQYLQRSRE 196

Query: 175 AQPQAQVMFQTINLIQTILDGETQAFLFV-----DELLKAKHLTQVDNGMRVLQYRLDEL 229
            Q + Q ++    +   I+D        +     D +L   H+  ++N    L+   DE 
Sbjct: 197 VQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIRYLEN----LKKTADEN 252

Query: 230 SRLSQPLFTQPSSIAYQQLLEEWRNVLRLEGDFQQSLRDRVVLTQKLESTSEQLQIQLDQ 289
            R    L   PS+I  +Q ++E   +  ++     ++RD V   + L   S   +  L +
Sbjct: 253 IRA---LDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDASRAREATLGR 309

Query: 290 QHTAIADLVANADALFVQVKGQTAQLVQEGNRVLLICFGLSIGLSLLLMYYFVHKRIVGR 349
             T +   + ++         +  Q+V+    ++L+   L++ L+  L +YF+  R+V R
Sbjct: 310 FRTLLEAQLGSSHQQMQTFNQRLEQIVRVSGGLILVATLLALLLAWGLNHYFIRSRLVKR 369

Query: 350 LHRLSESLDAIIHNDLSHPITVDGKDEIGALSEQL 384
              L++++  I        I V G+DE+G ++  L
Sbjct: 370 FTALNQAVVQIGLGRTDSTIPVYGRDELGRIARLL 404



 Score = 25.8 bits (55), Expect = 0.008
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 275 KLESTSEQLQIQLDQQHTAIADLVANADALFVQVKGQTAQLVQEGNRVLLICFGLSIGLS 334
           +L     QL+ ++ ++    ADL A  D L      QTA+L   G  +  +   ++  L+
Sbjct: 410 QLNMQRRQLEQEVAERKEIEADLRAMQDELI-----QTAKLAVVGQTMTTLAHEINQPLN 464

Query: 335 LLLMYYFVHKRIV 347
            L MY F   R +
Sbjct: 465 ALSMYLFTAGRAI 477