Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  145 bits (366), Expect = 3e-39
 Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 30/364 (8%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           TVL+IDD++D+ +     +    L   AV    +A   +      +   DM +P   G E
Sbjct: 5   TVLVIDDERDIRELLTITLGRMDLQVDAVGTVAEARRALAERSYDLCFTDMRLPDGTGHE 64

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
           +++ I A    +PV +IT +G++  AV A+K GA DF+ KP++   L  L++  L L   
Sbjct: 65  IIELIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALRLAEE 124

Query: 143 FIEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQ- 201
                          L+G S+ M+Q+R+ +A+ A     V I GESG G+  +A LIH+ 
Sbjct: 125 RRSGAAAAKTGDSSRLIGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKELVARLIHEQ 184

Query: 202 --------LTTNNGHLPWVELVAS--------AKTEWST-VEPKVQESAGGTLLIDHIEL 244
                   +  N G +P  EL+ S        + T  ST  E   Q + GGTL +D +  
Sbjct: 185 GPRASGPFVPVNCGAIP-SELMESEFFGHRKGSFTGASTDKEGLFQAAQGGTLFLDEVAE 243

Query: 245 LSEEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLPELYYLL 295
           L   +Q  +++++  QE+  RP           R+++   +   QL+ Q Q   +L+Y +
Sbjct: 244 LPLHMQVKLLRAI--QEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQDLFYRI 301

Query: 296 NQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELR 355
           N  ++ VP LR+R  D++ L  + LK    K G+ +  + P     L A+ +PGNVREL 
Sbjct: 302 NVIELRVPPLRERRGDVSQLSAFILKALAGKSGESVGQLSPSARGALEAYDFPGNVRELE 361

Query: 356 NVAE 359
           N+ E
Sbjct: 362 NILE 365