Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

 Score =  212 bits (539), Expect = 2e-59
 Identities = 143/436 (32%), Positives = 232/436 (53%), Gaps = 33/436 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           VLL+DD++ +  S    + +AG+   +      A+  I  D+ G+V+ D+ +P   G+EL
Sbjct: 22  VLLVDDEEMIRLSIEQTLDLAGIDVASFASAEAALPAIGRDYPGIVVTDVRLPARDGLEL 81

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L  I+  D ++PV++ITGHGD+ MAV A++ GA DF+EKP      + ++K+ LE R   
Sbjct: 82  LADIRRRDPELPVVLITGHGDVAMAVSAMREGAYDFIEKPFVSDAFVEVVKRALEKRALV 141

Query: 144 IEQKLLLSR-----SVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
           +E + L +      +++R LVG+SA M ++R  VAQ A  +  V+++GE+G G+  +A  
Sbjct: 142 LENRRLRTALDRGDAIERHLVGQSAAMRRLRDDVAQLASTSADVLVLGETGAGKEQVARA 201

Query: 199 IHQ---------LTTNNGHLP----WVELVASAKTEWSTVEP----KVQESAGGTLLIDH 241
           +H+         +  N G +P      E+       ++        K++ ++GGTL +D 
Sbjct: 202 LHEGGVRRDKPFVAVNCGAIPESMFESEMFGHEAGAFTGAGKRRIGKIEHASGGTLFLDE 261

Query: 242 IELLSEEVQRNVVQSLLNQ--ERL--NRP---RTRVIAVIDQPPEQLIAQNQLLPELYYL 294
           +E +   +Q  +++ L ++  ERL  N P     RVIA   +    L    +   +L++ 
Sbjct: 262 VESMPLAMQVKLLRVLQDRRIERLGSNTPVPVDLRVIAATKEDLGALADAGRFRKDLFFR 321

Query: 295 LNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVREL 354
           L+  ++ +P LR+R +DI  LF  FL Q+  K  +P+  V P     L    WPGNVREL
Sbjct: 322 LDVVKLVLPPLRERREDIPLLFELFLVQAAVKYQRPVVEVPPSLRRALMLADWPGNVREL 381

Query: 355 RNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADAANYL 414
           +N AE + +G +                 L+EL+D  E+ VIEDAL     RV+ AA  L
Sbjct: 382 KNAAERHMLGFL----APDFTGGAAAAPSLNELLDRVERLVIEDALKASGNRVSAAALAL 437

Query: 415 QVPRKKLYLRMKKHGL 430
            +PRK L+ RMK+ GL
Sbjct: 438 NIPRKTLHDRMKRLGL 453