Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Transcriptional response regulatory protein GlrR from Variovorax sp. SCN45

 Score =  162 bits (410), Expect = 2e-44
 Identities = 129/445 (28%), Positives = 206/445 (46%), Gaps = 33/445 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L++DDD D+L      +S AG    AV     A++ ++ +   +VL D+ +P   G++L
Sbjct: 8   LLVVDDDPDMLRLLSMRLSSAGYQVTAVTSAETALTQLEIEHPQLVLSDVRLPGRDGLQL 67

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
             +I+     +PVI++T HG IP AVEA   G   +L KP +  +LL  I Q L L    
Sbjct: 68  FDEIRKRHPSLPVILLTAHGTIPDAVEATARGVFTYLTKPYDGRELLDKIAQALALGAPA 127

Query: 144 IEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQ-- 201
                    S + E+V +S +M ++ +     A  +  V++ G+SG G+  +A  IH+  
Sbjct: 128 TTPSKAGDDSWRSEIVSRSNRMAELLAEARMVAKSDASVLLRGDSGAGKELLARAIHKAS 187

Query: 202 -------LTTNNGHLPWV----ELVASAKTEWSTVEPK----VQESAGGTLLIDHIELLS 246
                  +  N G +P      EL    K  ++          Q++ GGTLL+D I  + 
Sbjct: 188 ARADKPFVAVNCGAIPEALLESELFGHMKGAFTDAHANHKGLFQQADGGTLLLDEIGDMP 247

Query: 247 EEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLPELYYLLNQ 297
             +Q  +++ L  QER  RP           R+++   +  +  +   Q   +LYY LN 
Sbjct: 248 PALQVKLLRVL--QERAVRPLGASQSIQVDVRIVSATHRDLDAAMEAGQFREDLYYRLNV 305

Query: 298 GQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRNV 357
             + +P L  R +DI  L ++FL++   K GK +    P  L  L    WPGNVR+L NV
Sbjct: 306 VTLTLPPLSARREDIPLLANHFLQRLSTKYGKRLSGFAPEALKALTTAAWPGNVRQLFNV 365

Query: 358 AE----LYAIGIVKLAGKERLYNQEEM-LSPLDELVDDYEKQVIEDALFLFSGRVADAAN 412
            E    L +  ++ LA  +R      + +    E    +E+  +   L L  G VADAA 
Sbjct: 366 VEQVCALSSSPLIPLALVQRALRVPSVEVQTYAEAKQRFERDYLVGLLKLTDGNVADAAR 425

Query: 413 YLQVPRKKLYLRMKKHGLEKDAFKA 437
                R + Y  ++KH L    FKA
Sbjct: 426 LADRNRTEFYRLLQKHELTPGHFKA 450