Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., NtrX from Sphingobium sp. HT1-2

 Score =  173 bits (438), Expect = 1e-47
 Identities = 124/453 (27%), Positives = 224/453 (49%), Gaps = 44/453 (9%)

Query: 20  MKSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMP--Q 77
           M   +L++DD++D+ D    ++   G T +   +   A+  +      +VLLD+++   +
Sbjct: 1   MALDILIVDDEEDIRDLVAGVLEDEGFTTRTAANSDSAIEALDSRRPSLVLLDVWLQGSK 60

Query: 78  LHGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHL 137
           L G+ELL +IK  D  +PV++I+GHG+I  AV A++ GA DF+EKP    +LL L+ +  
Sbjct: 61  LDGLELLDEIKRRDATVPVLMISGHGNIDTAVAAIRKGAADFIEKPFEADRLLHLVARAT 120

Query: 138 ELRRSFIEQKLLLSR-SVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIA 196
           E  R   E + L +R     EL G SA +  +R+ + + A     V+I G +G G+   A
Sbjct: 121 ETERLRRENQTLRARFGQDDELTGTSASINGVRATIKKVAGTGSRVLISGPAGVGKEVAA 180

Query: 197 YLIHQLTTNNGHLPWVELVASAKTEWSTVEPK---------------VQESAGGTLLIDH 241
            ++H   +     P++ +VA+A+ +   VE +               ++++ GGTL +D 
Sbjct: 181 RMLHS-WSGRADAPFI-IVAAARMDPDRVEEELFGVEDPSGLVRPGYLEQAHGGTLYLDE 238

Query: 242 IELLSEEVQRNVVQSLLNQ-------ERLNRPRTRVIAVIDQPPEQLIAQNQLLPELYYL 294
           I  +    Q  +++ L +Q       +R  +   RVI+   +     I + +   +L+Y 
Sbjct: 239 IADMPVTTQGKILRVLTDQSFTRVGGQRQVKVDVRVISSTARNLTAEIEERRFREDLFYR 298

Query: 295 LNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVREL 354
           LN   + +P L +R DDI  L  ++L +         P +    +A L+A++WPGNVR+L
Sbjct: 299 LNVVPLQIPSLSERRDDIPPLVEHYLARFAADRRVNPPEIASDAMAALQANEWPGNVRQL 358

Query: 355 RNVAELY-------AIGIVKL----------AGKERLYNQEEMLSPLDELVDDYEKQVIE 397
           RNV E          IG ++L           G + +     M +PL E  + +E++ + 
Sbjct: 359 RNVIERTMILAPGDRIGRIELDMLPAELTSGGGGDGIGQSAIMGAPLREARESFEREYLR 418

Query: 398 DALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
             +  FSG ++  A ++ + R  L+ ++K  G+
Sbjct: 419 IQIRRFSGNISRTATFIGMERSALHRKLKLLGI 451