Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 2e-57
 Identities = 139/453 (30%), Positives = 235/453 (51%), Gaps = 50/453 (11%)

Query: 20  MKSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLH 79
           M ++V+++DD+  +  +    +S++G + +        ++H+   + GV++ D+ MP + 
Sbjct: 1   MLNSVIVVDDEASIRTAVEQWLSLSGFSVELFARAEACLAHLPQHFPGVIISDVRMPGMD 60

Query: 80  GMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLEL 139
           G++LL++++A D  +PVI++TGHGD+PMAVEA++ GA DFLEKP  P  LL  +++ LE 
Sbjct: 61  GLQLLERLQANDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQDLLGSLRRALEK 120

Query: 140 RRSFIEQKLL-----LSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHT 194
           R+  +E + L     L   ++  L+G S  ++Q+R  V   A L  +V+I GE+G G+  
Sbjct: 121 RQLVLENRRLHEQADLKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKER 180

Query: 195 IAYLIHQLTTNNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGG 235
           +A  +H         P+V L  +A  E S  E                    K++ + GG
Sbjct: 181 VARCLHDFGPRAAK-PFVALNCAAIPE-SLFEAELFGHESGAFTGAQGKRIGKLEYANGG 238

Query: 236 TLLIDHIELLSEEVQRNVVQSLLNQ--ERLNRPRT-----RVIAVIDQPPEQLIAQNQLL 288
           T+ +D IE +    Q  +++ +  Q  ERL   ++     R+IA       +     +  
Sbjct: 239 TVFLDEIESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFR 298

Query: 289 PELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWP 348
            +L Y LN  ++ +  LR+R +DI  LF +F + +  KLG+  P +    LA L +H WP
Sbjct: 299 EDLAYRLNVAELRLAPLRERREDIPLLFEHFARAAGEKLGRAAPPLSGAQLAQLLSHDWP 358

Query: 349 GNVRELRNVAELYAIGI------VKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFL 402
           GNVREL N AE +A+G+      V  AG+            L E ++ +E Q +  AL  
Sbjct: 359 GNVRELANAAERHALGLGSPNIEVAPAGQS-----------LGEQMEAFEAQCLRAALRQ 407

Query: 403 FSGRVADAANYLQVPRKKLYLRMKKHGLEKDAF 435
             G +      LQ+PR+ L  +M++HGL ++ F
Sbjct: 408 HGGEIKSVMEALQLPRRTLNEKMQRHGLVREDF 440