Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 5e-64
 Identities = 153/448 (34%), Positives = 240/448 (53%), Gaps = 37/448 (8%)

Query: 21  KSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHG 80
           ++ V+L+DDD  +  +    + +AGL   A+ +       I+ DW GVV+ D+ MP + G
Sbjct: 10  RAQVILVDDDPHLRQALSQTLDLAGLKVVALAEAQGLAERIEADWPGVVVSDIRMPGIDG 69

Query: 81  MELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELR 140
           ++LL+Q+   D ++PV++ITGHGD+P+AV+A++ GA DFLEKP     LL  +++ L LR
Sbjct: 70  LQLLEQLHGRDSELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFATDALLDSVRRALALR 129

Query: 141 RSFIEQ---KLLLS--RSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTI 195
           R  ++    +L LS  + +   LVG S  M ++R  +   A     V+I+GE+G G+  +
Sbjct: 130 RLVLDNRSLRLALSDRQQLATRLVGHSPAMLRLREQIGALAGTRADVLILGETGAGKEVV 189

Query: 196 AYLIHQLTTNNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGGT 236
           A  +H L++ +   P+V + A A  E S VE                    K + + GGT
Sbjct: 190 ARALHDLSSRS-EGPFVAINAGALAE-SVVESELFGHEPGAFTGAQKRRIGKFEFANGGT 247

Query: 237 LLIDHIELLSEEVQRNVVQSLLNQ--ERLNRPR-----TRVIAVIDQPPEQLIAQNQLLP 289
           L +D IE +S +VQ  +++ L  +  ERL   +      R+IA   +   Q   Q +   
Sbjct: 248 LFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRA 307

Query: 290 ELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPG 349
           +LYY LN   + +P LR+R DDI  LF +F   +  + G     ++P   ALL  H WPG
Sbjct: 308 DLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASQRHGLSPHALQPAQRALLLRHDWPG 367

Query: 350 NVRELRNVAELYAIGI-VKLAGK--ERLYNQEEMLS-PLDELVDDYEKQVIEDALFLFSG 405
           NVREL+N AE +A+G+ + L G+          MLS  L E V+ +E+ +I   L    G
Sbjct: 368 NVRELQNAAERFALGLELALDGQAPSAAAPAAPMLSGNLSEQVEQFERSLIAAELAQPHG 427

Query: 406 RVADAANYLQVPRKKLYLRMKKHGLEKD 433
            +   A  L +PRK L+ +++KHGL  D
Sbjct: 428 SMRSLAEALGIPRKTLHDKLRKHGLNFD 455