Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  159 bits (403), Expect = 1e-43
 Identities = 136/463 (29%), Positives = 220/463 (47%), Gaps = 66/463 (14%)

Query: 24  VLLIDDDQD---VLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHG 80
           +LLIDDD     +L  YL        TA    D  + +     D   ++L D  +P   G
Sbjct: 4   ILLIDDDPAFCLMLKGYLKRQQYEVETAYTANDGLRVLKASSFD---LILTDFRLPDKDG 60

Query: 81  MELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELR 140
           +ELL QI+ +  ++PVI++T + DI  AV A+KMGA +++ KPINP + L +IK  L  R
Sbjct: 61  LELLSQIRVLTQEVPVILMTTYADIRTAVRAIKMGAFEYITKPINPDETLLVIKNALN-R 119

Query: 141 RSFIEQKLLLSRSVK--RELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
           ++  EQ+ + + S    + + G+S Q EQI   ++  A  N  V+I GESG G+  +A +
Sbjct: 120 KAEAEQEAVSTASAGSFQFVRGQSPQAEQIEEFISLVAPTNLSVIIEGESGTGKEYVARM 179

Query: 199 IHQLTTNNGHLPWVELVASAKTE------------------WSTVEPKVQESAGGTLLID 240
           IH+ +  +   P+V +   A ++                        + + + GGTL +D
Sbjct: 180 IHEQSKRHDR-PFVAIDCGALSKELAGSELFGYVKGAFTGALQDKRGQFEAAEGGTLFLD 238

Query: 241 HIELLSEEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLPEL 291
            I  L  EVQ  ++++L  QER  R            RV+A  ++   Q +A  Q   +L
Sbjct: 239 EIGNLPYEVQVKLLRAL--QERKVRKLGSTTDQNVDVRVLAATNEDLVQAVANGQFREDL 296

Query: 292 YYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNV 351
           Y+ LN+ +I++P LR R  D+    ++FL+Q+  +L K +   +      +  + WPGN+
Sbjct: 297 YHRLNEFKINLPPLRDRDGDVVLFANHFLQQANRELEKAVQGFDAATEDAMLRYNWPGNL 356

Query: 352 RELRNVAELYAIGIVKLAGKERLYNQE----------------EMLSPLDELVDDY---- 391
           REL+NV +      V LA  E +  QE                   SP D +  D     
Sbjct: 357 RELKNVVK----RAVLLAKSEFVTLQELPAEIVHYTPAPQQASVAYSPHDPMETDLKSIN 412

Query: 392 ---EKQVIEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGLE 431
              E+++I   L       + AA  L + RK LY ++K + +E
Sbjct: 413 ERTEREMILAMLERVKYNKSKAARLLNIDRKTLYNKLKLYNIE 455