Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  149 bits (376), Expect = 2e-40
 Identities = 121/452 (26%), Positives = 208/452 (46%), Gaps = 50/452 (11%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQL----- 78
           VL++DD+ DVL +   L+           +P   +  ++      +LLDM          
Sbjct: 9   VLVVDDETDVLFALKMLLKTEVKEVVTEKNPENLLGLLERQKFDAILLDMNFKSALNTGN 68

Query: 79  HGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLE 138
            G+  L+QI   D    VI+IT +GD+ +AV+++K GA DF+ KP +  +LL  +   L+
Sbjct: 69  EGLFWLRQILERDKGASVILITAYGDVELAVKSLKEGAADFIVKPWHNDKLLETLHHTLD 128

Query: 139 LRRSFIEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
            R+          ++    ++G+S  ++++   + + A    +V+I+GE+G G+  +A  
Sbjct: 129 RRQQKPRTAAAPPKNTSTSILGESDAIKEVLYKIEKIAPTEANVLILGENGTGKELVARA 188

Query: 199 IHQLTTNNGHLPWV--------------ELVASAKTEWSTVEP----KVQESAGGTLLID 240
           +H+ +    + P+V              EL  S K  ++        + + + GGTL +D
Sbjct: 189 LHEKSFRAAN-PFVSVDMGALTDSLFESELFGSKKGAFTDAREDRAGRFETANGGTLFLD 247

Query: 241 HIELLSEEVQRNVVQSLLNQERL----NRP---RTRVIAVIDQPPEQLIAQNQLLPELYY 293
            I  +S  +Q  ++  L N++      N P     R+I+  ++P  +L A+NQ   +L Y
Sbjct: 248 EIGNISPAMQAKLLTVLQNRQVTPLGSNTPVPVDIRLISATNEPIYELAARNQFRKDLIY 307

Query: 294 LLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRE 353
            +N  +I +P LRQR  D+  L  +F      K  KP+P      L  L+ H WPGNVRE
Sbjct: 308 RINTVEIMLPPLRQRHGDVELLARHFAAVYAQKNHKPVPEFAAATLQKLKQHSWPGNVRE 367

Query: 354 LRNVAELYAIGIVKLAGKERLYNQEEMLSPLDEL---------------VDDYEKQVIED 398
           L++  E   I    LA    L  Q+   SP++                 + + E++ I  
Sbjct: 368 LQHAVERAII----LAESHTLQPQDFSFSPVEMAPAAPAAAYTPETPVPLSEIERETIVR 423

Query: 399 ALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
           AL    G ++  A  L + R  LY R+ KH +
Sbjct: 424 ALEKNKGNISRTAKELGLTRTALYRRLNKHDI 455